Factsheet for TraesCS5D01G039300.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G030700.1	Wheat	mitochondrion, plastid, vacuole	93.57	94.79
TraesCS5A01G031100.1	Wheat	mitochondrion	87.78	88.64
HORVU5Hr1G008160.5	Barley	mitochondrion	89.39	82.74
VIT_00s1450g00010.t01	Wine grape	cytosol, peroxisome	39.87	77.5
EES16390	Sorghum	plastid	75.24	75.97
Zm00001d000230_P002	Maize	plastid	73.31	73.79
VIT_10s0003g03850.t01	Wine grape	cytosol, peroxisome, plastid	53.38	71.24
KRH21081	Soybean	plastid	60.13	61.51
KRH11171	Soybean	plastid	54.02	59.79
PGSC0003DMT400076806	Potato	plastid	53.38	54.97
Solyc08g048550.2.1	Tomato	plastid	52.09	52.94
CDX99473	Canola	plastid	53.05	52.55
CDX78844	Canola	plastid	52.73	51.9
Bra013300.1-P	Field mustard	plastid	52.73	51.9
AT4G18370.1	Thale cress	plastid	52.73	50.77
Os12t0616600-01	Rice	plastid, vacuole	25.08	50.0
TraesCS1D01G416000.1	Wheat	plastid	41.8	30.3
TraesCS2D01G323700.1	Wheat	plastid	40.51	28.31
VIT_00s1463g00010.t01	Wine grape	plastid	11.25	26.52
TraesCS4D01G084800.2	Wheat	cytosol	24.12	16.13

Protein Annotations

MapMan:19.4.2.3	Gene3D:2.40.10.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0004252	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006091	GO:GO:0006508	GO:GO:0008150
GO:GO:0008152	GO:GO:0009507	GO:GO:0009536	GO:GO:0009543	GO:GO:0009579	GO:GO:0009987
GO:GO:0010206	GO:GO:0015979	GO:GO:0016787	GO:GO:0019538	GO:GO:0031977	PFAM:PF13365
PRINTS:PR00834	PANTHER:PTHR43019	PANTHER:PTHR43019:SF3	InterPro:Peptidase_S1C	InterPro:Peptidase_S1_PA	SUPFAM:SSF50494
EnsemblPlantsGene:TraesCS5D01G039300	EnsemblPlants:TraesCS5D01G039300.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr5D:-:40708211..40712322

Molecular Weight (calculated)

32725.8 Da

IEP (calculated)

6.402

GRAVY (calculated)

-0.143

Length

311 amino acids

Sequence
(BLAST)

001: MALQPLLRLL LRPAPTPPPP TRRTPHLPAP FSTRRGTAAA LLLLAVAAPP PRPARAEPDG EDDVDEPHVV RLFEEATPSV VFIKDLLVAP PPRTRGRDGG
101: GAQPVDDEEG GATVEGTGSG FVWDSLGHIV TNYHVVAKLA GDGSESHRCK VFLEDSTGTS YSKEGRLIGY DPTYDLAVLK VDVDGDRLRP ALLGTSQGLR
201: VGQSCFAIGN PLGYEHTLTT GVVSGLGREI PSPNGRVIRG AIQTDAAINA GNSGGPLIDS YGHVIGVNTA TFTRKGSGIS SGVNFAIPID TVVRSVPNLI
301: VYGTDVSNRF Y

Best Arabidopsis Sequence Match ( AT4G18370.1 )
(BLAST)

001: MTMALASSKA FSSIFNTLSP INQSKFVLAC SGSNHVDVID RRRRIMIFGS SLALTSSLLG SNQQRLPMES AIALEQFKEK EEELEEEEER NVNLFQKTSP
101: SVVYIEAIEL PKTSSGDILT DEENGKIEGT GSGFVWDKLG HIVTNYHVIA KLATDQFGLQ RCKVSLVDAK GTRFSKEGKI VGLDPDNDLA VLKIETEGRE
201: LNPVVLGTSN DLRVGQSCFA IGNPYGYENT LTIGVVSGLG REIPSPNGKS ISEAIQTDAD INSGNSGGPL LDSYGHTIGV NTATFTRKGS GMSSGVNFAI
301: PIDTVVRTVP YLIVYGTAYR DRF

Arabidopsis Description

DEGP5Protease Do-like 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SEL7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.