CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra013300.1-P	Field mustard	plastid	97.78	97.78
CDX99473	Canola	plastid	82.59	83.12
VIT_00s1450g00010.t01	Wine grape	cytosol, peroxisome	40.19	79.38
AT4G18370.1	Thale cress	plastid	80.06	78.33
KRH21081	Soybean	plastid	61.08	63.49
KRH11171	Soybean	plastid	55.38	62.28
PGSC0003DMT400076806	Potato	plastid	58.54	61.26
Solyc08g048550.2.1	Tomato	plastid	57.59	59.48
EES16390	Sorghum	plastid	52.22	53.57
TraesCS5B01G030700.1	Wheat	mitochondrion, plastid, vacuole	51.58	53.09
TraesCS5A01G031100.1	Wheat	mitochondrion	51.58	52.92
TraesCS5D01G039300.1	Wheat	mitochondrion	51.9	52.73
Zm00001d000230_P002	Maize	plastid	50.95	52.1
HORVU5Hr1G008160.5	Barley	mitochondrion	51.58	48.51
CDY65943	Canola	cytosol, extracellular, plastid	15.82	34.01
Os12t0616600-01	Rice	plastid, vacuole	15.82	32.05
CDX86460	Canola	plastid	38.61	27.85
CDY58511	Canola	plastid	37.97	27.59
CDY30272	Canola	plastid	37.97	26.67
CDX74425	Canola	plastid	37.66	26.39
CDY07792	Canola	mitochondrion	21.84	19.01
CDX80635	Canola	mitochondrion, plastid	23.1	17.1
CDX86147	Canola	plastid	23.1	16.63

Protein Annotations

MapMan:19.4.2.3	Gene3D:2.40.10.10	GO:A0A078CS06	EnsemblPlants:CDX78844	ProteinID:CDX78844	ProteinID:CDX78844.1
ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0004252	GO:GO:0006508	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00131319001	PFAM:PF13365	PRINTS:PR00834
PANTHER:PTHR43019	PANTHER:PTHR43019:SF3	InterPro:Peptidase_S1C	InterPro:Peptidase_S1_PA	SUPFAM:SSF50494	UniParc:UPI0004EDCB62
SEG:seg	:	:	:	:	:

Description

BnaA01g09110D

Coordinates

chrLK031816:+:411437..412958

Molecular Weight (calculated)

33925.8 Da

IEP (calculated)

4.678

GRAVY (calculated)

-0.223

Length

316 amino acids

Sequence
(BLAST)

001: MDVALASSKA CYSISYTFTP FSRSNSVLAS SGSTPDQRRR TVIFGSSLAL ASSLLASNQQ SFPVESAIAL EQLKEEELEE EEERNVNLFQ KTSPSVVYIE
101: DIELPKTSSD ESNAEDNAKI EGTGSGFVWD KLGHIVTNYH VIAKLATDQS GLQRCKVSLV DAMGTRFTKD GKIVGLDPDN DLAVLKIETE GRELKPVALG
201: TSSDLRVGQS CFAIGNPYGY ENTLTIGVVS GLGREIPSPN GKSIREAIQT DADINSGNSG GPLLDSYGHT IGVNTATFTR KGTGMSSGVN FAIPIDTVVR
301: TVPYLIVYGT AYRDRF

Best Arabidopsis Sequence Match ( AT4G18370.1 )
(BLAST)

001: MTMALASSKA FSSIFNTLSP INQSKFVLAC SGSNHVDVID RRRRIMIFGS SLALTSSLLG SNQQRLPMES AIALEQFKEK EEELEEEEER NVNLFQKTSP
101: SVVYIEAIEL PKTSSGDILT DEENGKIEGT GSGFVWDKLG HIVTNYHVIA KLATDQFGLQ RCKVSLVDAK GTRFSKEGKI VGLDPDNDLA VLKIETEGRE
201: LNPVVLGTSN DLRVGQSCFA IGNPYGYENT LTIGVVSGLG REIPSPNGKS ISEAIQTDAD INSGNSGGPL LDSYGHTIGV NTATFTRKGS GMSSGVNFAI
301: PIDTVVRTVP YLIVYGTAYR DRF

Arabidopsis Description

DEGP5Protease Do-like 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SEL7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.