Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra013300.1-P | Field mustard | plastid | 78.33 | 80.06 |
| CDX78844 | Canola | plastid | 78.33 | 80.06 |
| VIT_00s1450g00010.t01 | Wine grape | cytosol, peroxisome | 39.32 | 79.38 |
| CDX99473 | Canola | plastid | 74.92 | 77.07 |
| PGSC0003DMT400076806 | Potato | plastid | 58.2 | 62.25 |
| KRH21081 | Soybean | plastid | 58.51 | 62.17 |
| KRH11171 | Soybean | plastid | 52.63 | 60.5 |
| Solyc08g048550.2.1 | Tomato | plastid | 56.35 | 59.48 |
| EES16390 | Sorghum | plastid | 52.01 | 54.55 |
| TraesCS5B01G030700.1 | Wheat | mitochondrion, plastid, vacuole | 50.46 | 53.09 |
| TraesCS5D01G039300.1 | Wheat | mitochondrion | 50.77 | 52.73 |
| TraesCS5A01G031100.1 | Wheat | mitochondrion | 50.15 | 52.6 |
| Zm00001d000230_P002 | Maize | plastid | 50.15 | 52.43 |
| HORVU5Hr1G008160.5 | Barley | mitochondrion | 50.15 | 48.21 |
| Os12t0616600-01 | Rice | plastid, vacuole | 15.17 | 31.41 |
| AT5G39830.1 | Thale cress | cytosol, plastid | 38.08 | 27.46 |
| AT3G27925.1 | Thale cress | plastid | 36.84 | 27.11 |
| AT5G27660.2 | Thale cress | mitochondrion | 22.91 | 17.01 |
Protein Annotations
| MapMan:19.4.2.3 | Gene3D:2.40.10.10 | PDB:4IC5 | EntrezGene:827564 | ProteinID:AEE84033.1 | EMBL:AF114386 |
| EMBL:AK176772 | ArrayExpress:AT4G18370 | EnsemblPlantsGene:AT4G18370 | RefSeq:AT4G18370 | TAIR:AT4G18370 | RefSeq:AT4G18370-TAIR-G |
| EnsemblPlants:AT4G18370.1 | TAIR:AT4G18370.1 | EMBL:AY056227 | EMBL:AY091427 | ProteinID:CAA16717.1 | ProteinID:CAB78839.1 |
| ncoils:Coil | Symbol:DEG5 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004252 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006091 | GO:GO:0006508 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008233 | GO:GO:0008236 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009543 |
| GO:GO:0009579 | GO:GO:0009987 | GO:GO:0010206 | GO:GO:0015979 | GO:GO:0016787 | GO:GO:0019538 |
| GO:GO:0031977 | RefSeq:NP_567552.2 | PFAM:PF13365 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00834 | PANTHER:PTHR43019 | PANTHER:PTHR43019:SF3 |
| InterPro:Peptidase_S1C | InterPro:Peptidase_S1_PA | UniProt:Q9SEL7 | SUPFAM:SSF50494 | UniParc:UPI00000A4068 | SEG:seg |
Description
DEGP5Protease Do-like 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SEL7]
Coordinates
chr4:+:10148951..10151218
Molecular Weight (calculated)
34925.4 Da
IEP (calculated)
4.960
GRAVY (calculated)
-0.178
Length
323 amino acids
Sequence
(BLAST)
(BLAST)
001: MTMALASSKA FSSIFNTLSP INQSKFVLAC SGSNHVDVID RRRRIMIFGS SLALTSSLLG SNQQRLPMES AIALEQFKEK EEELEEEEER NVNLFQKTSP
101: SVVYIEAIEL PKTSSGDILT DEENGKIEGT GSGFVWDKLG HIVTNYHVIA KLATDQFGLQ RCKVSLVDAK GTRFSKEGKI VGLDPDNDLA VLKIETEGRE
201: LNPVVLGTSN DLRVGQSCFA IGNPYGYENT LTIGVVSGLG REIPSPNGKS ISEAIQTDAD INSGNSGGPL LDSYGHTIGV NTATFTRKGS GMSSGVNFAI
301: PIDTVVRTVP YLIVYGTAYR DRF
101: SVVYIEAIEL PKTSSGDILT DEENGKIEGT GSGFVWDKLG HIVTNYHVIA KLATDQFGLQ RCKVSLVDAK GTRFSKEGKI VGLDPDNDLA VLKIETEGRE
201: LNPVVLGTSN DLRVGQSCFA IGNPYGYENT LTIGVVSGLG REIPSPNGKS ISEAIQTDAD INSGNSGGPL LDSYGHTIGV NTATFTRKGS GMSSGVNFAI
301: PIDTVVRTVP YLIVYGTAYR DRF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.