Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 1
- mitochondrion 6
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX80635 | Canola | mitochondrion, plastid | 75.4 | 76.81 |
| CDX86147 | Canola | plastid | 72.41 | 71.75 |
| HORVU4Hr1G014960.11 | Barley | plastid | 55.17 | 61.54 |
| VIT_14s0060g02370.t01 | Wine grape | mitochondrion | 60.0 | 60.56 |
| GSMUA_Achr9P08110_001 | Banana | mitochondrion | 57.47 | 58.0 |
| TraesCS4B01G087500.1 | Wheat | mitochondrion | 55.4 | 57.11 |
| OQU83155 | Sorghum | mitochondrion | 56.09 | 57.01 |
| Zm00001d049018_P001 | Maize | mitochondrion | 55.17 | 56.21 |
| KRG96820 | Soybean | mitochondrion | 55.17 | 56.21 |
| TraesCS4A01G228900.1 | Wheat | mitochondrion | 53.33 | 54.46 |
| TraesCS4D01G084800.2 | Wheat | cytosol | 54.48 | 50.97 |
| GSMUA_Achr8P29040_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 39.77 | 50.73 |
| Os11t0246600-00 | Rice | mitochondrion | 49.66 | 48.87 |
| GSMUA_Achr6P28780_001 | Banana | mitochondrion | 48.51 | 43.42 |
| AT3G27925.1 | Thale cress | plastid | 23.45 | 23.23 |
| AT5G39830.1 | Thale cress | cytosol, plastid | 23.68 | 22.99 |
| AT4G18370.1 | Thale cress | plastid | 17.01 | 22.91 |
Protein Annotations
| MapMan:19.4.2.3 | Gene3D:2.30.42.10 | Gene3D:2.40.10.120 | EntrezGene:832828 | UniProt:A0A178UPC0 | UniProt:A0A1P8BBM9 |
| ProteinID:ANM68990.1 | ArrayExpress:AT5G27660 | EnsemblPlantsGene:AT5G27660 | RefSeq:AT5G27660 | TAIR:AT5G27660 | RefSeq:AT5G27660-TAIR-G |
| EnsemblPlants:AT5G27660.2 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004252 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 | GO:GO:0008236 | GO:GO:0016787 |
| GO:GO:0019538 | InterPro:IPR001478 | RefSeq:NP_001330700.1 | ProteinID:OAO94964.1 | InterPro:PDZ | InterPro:PDZ_sf |
| PFAM:PF13180 | PFAM:PF13365 | PRINTS:PR00834 | PFscan:PS50106 | PANTHER:PTHR22939 | PANTHER:PTHR22939:SF109 |
| InterPro:Peptidase_S1C | InterPro:Peptidase_S1_PA | SMART:SM00228 | SUPFAM:SSF50156 | SUPFAM:SSF50494 | UniParc:UPI0007E07001 |
Description
Trypsin family protein with PDZ domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8BBM9]
Coordinates
chr5:-:9789468..9792378
Molecular Weight (calculated)
46649.3 Da
IEP (calculated)
8.621
GRAVY (calculated)
-0.037
Length
435 amino acids
Sequence
(BLAST)
(BLAST)
001: MMNFLRRAVS SSKRSELIRI ISVATATSGI LYASTNPDAR TRVSLAIPES VRESLSLLPW QISPGLIHRP EQSLFGNFVF SSRVSPKSEA PINDEKGVSV
101: EASDSSSKPS NGYLGRDTIA NAAARIGPAV VNLSVPQGFH GISMGKSIGS GTIIDADGTI LTCAHVVVDF QNIRHSSKGR VDVTLQDGRT FEGVVVNADL
201: QSDIALVKIK SKTPLPTAKL GFSSKLRPGD WVIAVGCPLS LQNTVTAGIV SCVDRKSSDL GLGGKHREYL QTDCSINAGN SGGPLVNLDG EVIGVNIMKV
301: LAADGLGFSV PIDSVSKIIE HFKKSGRVIR PWIGLKMVEL NNLIVAQLKE RDPMFPDVER GVLVPTVIPG SPADRAGFKP GDVVVRFDGK PVETIKEVIE
401: IMDDRVGKRM QVVVERSNKE RVTLEVIPEE ANPDM
101: EASDSSSKPS NGYLGRDTIA NAAARIGPAV VNLSVPQGFH GISMGKSIGS GTIIDADGTI LTCAHVVVDF QNIRHSSKGR VDVTLQDGRT FEGVVVNADL
201: QSDIALVKIK SKTPLPTAKL GFSSKLRPGD WVIAVGCPLS LQNTVTAGIV SCVDRKSSDL GLGGKHREYL QTDCSINAGN SGGPLVNLDG EVIGVNIMKV
301: LAADGLGFSV PIDSVSKIIE HFKKSGRVIR PWIGLKMVEL NNLIVAQLKE RDPMFPDVER GVLVPTVIPG SPADRAGFKP GDVVVRFDGK PVETIKEVIE
401: IMDDRVGKRM QVVVERSNKE RVTLEVIPEE ANPDM
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.