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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 3
  • mitochondrion 6
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX80635 Canola mitochondrion, plastid 61.72 62.3
HORVU4Hr1G014960.11 Barley plastid 55.22 61.03
AT5G27660.2 Thale cress mitochondrion 60.56 60.0
KRG96820 Soybean mitochondrion 57.77 58.31
CDX86147 Canola plastid 59.16 58.09
GSMUA_Achr9P08110_001 Banana mitochondrion 57.77 57.77
TraesCS4B01G087500.1 Wheat mitochondrion 55.45 56.64
Zm00001d049018_P001 Maize mitochondrion 55.22 55.74
OQU83155 Sorghum mitochondrion 54.76 55.14
TraesCS4A01G228900.1 Wheat mitochondrion 54.29 54.93
TraesCS4D01G084800.2 Wheat cytosol 54.99 50.97
GSMUA_Achr8P29040_001 Banana cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 39.91 50.44
Os11t0246600-00 Rice mitochondrion 49.19 47.96
GSMUA_Achr6P28780_001 Banana mitochondrion 48.03 42.59
VIT_00s1450g00010.t01 Wine grape cytosol, peroxisome 11.83 31.88
VIT_10s0003g03850.t01 Wine grape cytosol, peroxisome, plastid 16.01 29.61
VIT_14s0108g00580.t01 Wine grape cytosol 22.04 22.67
VIT_18s0072g00970.t01 Wine grape plastid 22.27 22.43
VIT_00s1463g00010.t01 Wine grape plastid 4.41 14.39
Protein Annotations
EntrezGene:100264796wikigene:100264796MapMan:19.4.2.3Gene3D:2.30.42.10Gene3D:2.40.10.120ProteinID:CCB61850
ProteinID:CCB61850.1UniProt:F6I4L3EMBL:FN596746GO:GO:0003674GO:GO:0003824GO:GO:0004252
GO:GO:0005488GO:GO:0005515GO:GO:0006508GO:GO:0008150GO:GO:0008152GO:GO:0016787
GO:GO:0019538InterPro:IPR001478EntrezGene:LOC100264796wikigene:LOC100264796InterPro:PDZInterPro:PDZ_sf
PFAM:PF13180PFAM:PF13365PRINTS:PR00834PFscan:PS50106PANTHER:PTHR22939PANTHER:PTHR22939:SF109
InterPro:Peptidase_S1CInterPro:Peptidase_S1_PAMEROPS:S01.A08SMART:SM00228SUPFAM:SSF50156SUPFAM:SSF50494
TIGR:TC60597TIGR:TC65619UniParc:UPI000210999EArrayExpress:VIT_14s0060g02370EnsemblPlantsGene:VIT_14s0060g02370EnsemblPlants:VIT_14s0060g02370.t01
unigene:Vvi.11974RefSeq:XP_002279678RefSeq:XP_002279678.2RefSeq:XP_010659630.2SEG:seg:
Description
No Description!
Coordinates
chr14:+:1965372..1976185
Molecular Weight (calculated)
45248.0 Da
IEP (calculated)
7.469
GRAVY (calculated)
0.187
Length
431 amino acids
Sequence
(BLAST)
001: MARISTMNSV LRKVSVAAAA SGLLYLCRDS DSKTMVSISV PAQFREPLLR PWQIAQDIIH RSSFLSQGDA SQSGNLPPIF SRIGPVPSAD VNKEAFGKVG
101: DGVKPSCGFL GRDSIANAAA MVGPAVVNIS VPQGFNGMTI GKSIGSGTII DPDGTILTCA HVVVDFHGLN DSSKGKVDVT LQDGRSFQGT VLNADLHSDI
201: AIVKIKSSTP LPTAKLGTSS MLRPGDWVIA LGCPLSLQNT VTAGIVSCVD RNSNDLGLGG MRREYLQSDC AINAGNSGGP LVNIDGEVVG VNIMKVLAAD
301: GLAFAVPIDS VSTIIEHFKK NGRVIRPWLG LKMIDLNDML AAQLKEKDAK FPDLNRGILV PMVTPGSPGD LAGFHPGDVV TEFDGKPVVS IKEVVEIMGD
401: RAGIPLKVVV IRANNIRATL TVVPVEVSPV M
Best Arabidopsis Sequence Match ( AT5G27660.2 )
(BLAST)
001: MMNFLRRAVS SSKRSELIRI ISVATATSGI LYASTNPDAR TRVSLAIPES VRESLSLLPW QISPGLIHRP EQSLFGNFVF SSRVSPKSEA PINDEKGVSV
101: EASDSSSKPS NGYLGRDTIA NAAARIGPAV VNLSVPQGFH GISMGKSIGS GTIIDADGTI LTCAHVVVDF QNIRHSSKGR VDVTLQDGRT FEGVVVNADL
201: QSDIALVKIK SKTPLPTAKL GFSSKLRPGD WVIAVGCPLS LQNTVTAGIV SCVDRKSSDL GLGGKHREYL QTDCSINAGN SGGPLVNLDG EVIGVNIMKV
301: LAADGLGFSV PIDSVSKIIE HFKKSGRVIR PWIGLKMVEL NNLIVAQLKE RDPMFPDVER GVLVPTVIPG SPADRAGFKP GDVVVRFDGK PVETIKEVIE
401: IMDDRVGKRM QVVVERSNKE RVTLEVIPEE ANPDM
Arabidopsis Description
Trypsin family protein with PDZ domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8BBM9]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.