Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
- peroxisome 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os12t0616600-01 | Rice | plastid, vacuole | 30.3 | 25.64 |
| VIT_10s0003g03850.t01 | Wine grape | cytosol, peroxisome, plastid | 31.82 | 18.03 |
| KRH21081 | Soybean | plastid | 39.39 | 17.11 |
| EES16390 | Sorghum | plastid | 32.58 | 13.96 |
| Zm00001d000230_P002 | Maize | plastid | 30.3 | 12.95 |
| KRH11171 | Soybean | plastid | 27.27 | 12.81 |
| TraesCS5B01G030700.1 | Wheat | mitochondrion, plastid, vacuole | 28.03 | 12.05 |
| TraesCS5A01G031100.1 | Wheat | mitochondrion | 28.03 | 12.01 |
| TraesCS5D01G039300.1 | Wheat | mitochondrion | 26.52 | 11.25 |
| HORVU5Hr1G008160.5 | Barley | mitochondrion | 27.27 | 10.71 |
| VIT_18s0072g00970.t01 | Wine grape | plastid | 24.24 | 7.48 |
| VIT_14s0108g00580.t01 | Wine grape | cytosol | 19.7 | 6.21 |
| VIT_14s0060g02370.t01 | Wine grape | mitochondrion | 14.39 | 4.41 |
| VIT_00s1450g00010.t01 | Wine grape | cytosol, peroxisome | 2.27 | 1.88 |
Protein Annotations
| ArrayExpress:VIT_00s1463g00010 | EMBL:FN595354 | EnsemblPlants:VIT_00s1463g00010.t01 | EnsemblPlantsGene:VIT_00s1463g00010 | Gene3D:2.40.10.10 | PANTHER:PTHR43019 |
| PANTHER:PTHR43019:SF3 | ProteinID:CCB48483 | ProteinID:CCB48483.1 | SEG:seg | UniParc:UPI0002107ECE | UniProt:F6H8E0 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chrUn:+:39250661..39252618
Molecular Weight (calculated)
14503.8 Da
IEP (calculated)
4.479
GRAVY (calculated)
-0.286
Length
132 amino acids
Sequence
(BLAST)
(BLAST)
001: MVVLGCLQSI PSPIPTKESP SSSSSSPSSW SRSLGTRREA IMFGTCFVSS FFSFTPAFPS AIAQQEQDQF QQDEERVVHL FQDTSPSVVF IKDLEIVKSP
101: TSSSNESMLN DNENTKVEGT GSGFIWDKFG HI
101: TSSSNESMLN DNENTKVEGT GSGFIWDKFG HI
001: MTMALASSKA FSSIFNTLSP INQSKFVLAC SGSNHVDVID RRRRIMIFGS SLALTSSLLG SNQQRLPMES AIALEQFKEK EEELEEEEER NVNLFQKTSP
101: SVVYIEAIEL PKTSSGDILT DEENGKIEGT GSGFVWDKLG HIVTNYHVIA KLATDQFGLQ RCKVSLVDAK GTRFSKEGKI VGLDPDNDLA VLKIETEGRE
201: LNPVVLGTSN DLRVGQSCFA IGNPYGYENT LTIGVVSGLG REIPSPNGKS ISEAIQTDAD INSGM
101: SVVYIEAIEL PKTSSGDILT DEENGKIEGT GSGFVWDKLG HIVTNYHVIA KLATDQFGLQ RCKVSLVDAK GTRFSKEGKI VGLDPDNDLA VLKIETEGRE
201: LNPVVLGTSN DLRVGQSCFA IGNPYGYENT LTIGVVSGLG REIPSPNGKS ISEAIQTDAD INSGM
Arabidopsis Description
DEGP5Protease Do-like 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SEL7]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.