Factsheet for VIT_00s1450g00010.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 1
golgi 1
peroxisome 1
plastid 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
MultiLoc:	peroxisome
Plant-mPloc:	plastid
PProwler:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_10s0003g03850.t01	Wine grape	cytosol, peroxisome, plastid	96.25	66.09
PGSC0003DMT400076806	Potato	plastid	79.38	42.05
Solyc08g048550.2.1	Tomato	plastid	78.75	41.18
CDX99473	Canola	plastid	79.38	40.45
TraesCS5A01G031100.1	Wheat	mitochondrion	77.5	40.26
Bra013300.1-P	Field mustard	plastid	79.38	40.19
CDX78844	Canola	plastid	79.38	40.19
TraesCS5B01G030700.1	Wheat	mitochondrion, plastid, vacuole	76.88	40.07
TraesCS5D01G039300.1	Wheat	mitochondrion	77.5	39.87
Zm00001d000230_P002	Maize	plastid	76.25	39.48
AT4G18370.1	Thale cress	plastid	79.38	39.32
EES16390	Sorghum	plastid	75.62	39.29
HORVU5Hr1G008160.5	Barley	mitochondrion	76.25	36.31
VIT_14s0108g00580.t01	Wine grape	cytosol	51.88	19.81
VIT_18s0072g00970.t01	Wine grape	plastid	48.12	17.99
VIT_14s0060g02370.t01	Wine grape	mitochondrion	31.88	11.83
Os12t0616600-01	Rice	plastid, vacuole	2.5	2.56
VIT_00s1463g00010.t01	Wine grape	plastid	1.88	2.27

Protein Annotations

EntrezGene:100260091	wikigene:100260091	MapMan:19.4.2.3	Gene3D:2.40.10.10	ProteinID:CBI23552	ProteinID:CBI23552.3
UniProt:D7SZ68	EMBL:FN595344	GO:GO:0003674	GO:GO:0003824	GO:GO:0004252	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006091	GO:GO:0006508	GO:GO:0008150
GO:GO:0008152	GO:GO:0009507	GO:GO:0009536	GO:GO:0009543	GO:GO:0009579	GO:GO:0009987
GO:GO:0010206	GO:GO:0015979	GO:GO:0016787	GO:GO:0019538	GO:GO:0031977	EntrezGene:LOC100260091
wikigene:LOC100260091	PFAM:PF13365	PRINTS:PR00834	PANTHER:PTHR43019	PANTHER:PTHR43019:SF3	InterPro:Peptidase_S1C
InterPro:Peptidase_S1_PA	SUPFAM:SSF50494	UniParc:UPI0001BE260F	ArrayExpress:VIT_00s1450g00010	EnsemblPlantsGene:VIT_00s1450g00010	EnsemblPlants:VIT_00s1450g00010.t01
RefSeq:XP_002271488	RefSeq:XP_002271488.2	:	:	:	:

Description

No Description!

Coordinates

chrUn:-:39197995..39201812

Molecular Weight (calculated)

16861.0 Da

IEP (calculated)

8.880

GRAVY (calculated)

-0.011

Length

160 amino acids

Sequence
(BLAST)

001: VYLVDAKGNS FSREAKIIGY DPAYDLAVLK VDIEGNELKP VVLGTSRDIR VGQSCFAIGN PYGYENTLTT GVVSGLGREI PSPNGKAIRG AIQTDAAINS
101: GNSGGPLINS YGHVIGVNTA TFTRKGTGVS SGVNFAIPID TVVRTVPYLI VYGTPYSNRY

Best Arabidopsis Sequence Match ( AT4G18370.1 )
(BLAST)

001: MTMALASSKA FSSIFNTLSP INQSKFVLAC SGSNHVDVID RRRRIMIFGS SLALTSSLLG SNQQRLPMES AIALEQFKEK EEELEEEEER NVNLFQKTSP
101: SVVYIEAIEL PKTSSGDILT DEENGKIEGT GSGFVWDKLG HIVTNYHVIA KLATDQFGLQ RCKVSLVDAK GTRFSKEGKI VGLDPDNDLA VLKIETEGRE
201: LNPVVLGTSN DLRVGQSCFA IGNPYGYENT LTIGVVSGLG REIPSPNGKS ISEAIQTDAD INSGNSGGPL LDSYGHTIGV NTATFTRKGS GMSSGVNFAI
301: PIDTVVRTVP YLIVYGTAYR DRF

Arabidopsis Description

DEGP5Protease Do-like 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SEL7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.