Factsheet for Bra013300.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78844	Canola	plastid	97.78	97.78
VIT_00s1450g00010.t01	Wine grape	cytosol, peroxisome	40.19	79.38
AT4G18370.1	Thale cress	plastid	80.06	78.33
KRH21081	Soybean	plastid	60.76	63.16
KRH11171	Soybean	plastid	55.06	61.92
PGSC0003DMT400076806	Potato	plastid	58.54	61.26
Solyc08g048550.2.1	Tomato	plastid	57.59	59.48
EES16390	Sorghum	plastid	51.9	53.25
TraesCS5B01G030700.1	Wheat	mitochondrion, plastid, vacuole	51.58	53.09
TraesCS5A01G031100.1	Wheat	mitochondrion	51.58	52.92
TraesCS5D01G039300.1	Wheat	mitochondrion	51.9	52.73
Zm00001d000230_P002	Maize	plastid	50.95	52.1
HORVU5Hr1G008160.5	Barley	mitochondrion	51.58	48.51
Os12t0616600-01	Rice	plastid, vacuole	15.82	32.05
Bra025312.1-P	Field mustard	plastid	38.92	28.08
Bra040850.1-P	Field mustard	plastid	37.66	26.39

Protein Annotations

MapMan:19.4.2.3	Gene3D:2.40.10.10	EnsemblPlantsGene:Bra013300	EnsemblPlants:Bra013300.1	EnsemblPlants:Bra013300.1-P	ncoils:Coil
GO:GO:0003674	GO:GO:0003824	GO:GO:0004252	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006091	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507
GO:GO:0009536	GO:GO:0009543	GO:GO:0009579	GO:GO:0009987	GO:GO:0010206	GO:GO:0015979
GO:GO:0016787	GO:GO:0019538	GO:GO:0031977	UniProt:M4D9Z0	PFAM:PF13365	PRINTS:PR00834
PANTHER:PTHR43019	PANTHER:PTHR43019:SF3	InterPro:Peptidase_S1C	InterPro:Peptidase_S1_PA	SUPFAM:SSF50494	UniParc:UPI0002546084
SEG:seg	:	:	:	:	:

Description

AT4G18370 (E=1e-136) DEG5, DEGP5, HHOA | DEG5 (DEGP PROTEASE 5); catalytic/ serine-type endopeptidase/ serine-type peptidase

Coordinates

chrA01:+:4857109..4858566

Molecular Weight (calculated)

33947.9 Da

IEP (calculated)

4.939

GRAVY (calculated)

-0.217

Length

316 amino acids

Sequence
(BLAST)

001: MDVALASSKA CSSISYTFTP FSRSSSVLAC SGSNPDQRRR TVIFGSSLAL ASSLLASNQQ RFPVESAIAL EQLKEEKLEE EEERNVNLFQ KTSPSVVYIE
101: DIELPKTSSD ESNVEDNAKI EGTGSGFVWD KLGHIVTNYH VIAKLATDQS GLQRCKVSLV DAMGTRFTKD GKIVGLDPDN DLAVLKIETE GRELKPVALG
201: TSSDLRVGQS CFAIGNPYGY ENTLTIGVVS GLGREIPSPN GKSIREAIQT DADINSGNSG GPLLDSYGHT IGVNTATFTR KGTGMSSGVN FAIPIDTVVR
301: TVPYLIVYGT AYRDRF

Best Arabidopsis Sequence Match ( AT4G18370.1 )
(BLAST)

001: MTMALASSKA FSSIFNTLSP INQSKFVLAC SGSNHVDVID RRRRIMIFGS SLALTSSLLG SNQQRLPMES AIALEQFKEK EEELEEEEER NVNLFQKTSP
101: SVVYIEAIEL PKTSSGDILT DEENGKIEGT GSGFVWDKLG HIVTNYHVIA KLATDQFGLQ RCKVSLVDAK GTRFSKEGKI VGLDPDNDLA VLKIETEGRE
201: LNPVVLGTSN DLRVGQSCFA IGNPYGYENT LTIGVVSGLG REIPSPNGKS ISEAIQTDAD INSGNSGGPL LDSYGHTIGV NTATFTRKGS GMSSGVNFAI
301: PIDTVVRTVP YLIVYGTAYR DRF

Arabidopsis Description

DEGP5Protease Do-like 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SEL7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.