Factsheet for Bra040850.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 8

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74425	Canola	plastid	100.0	100.0
AT5G39830.1	Thale cress	cytosol, plastid	87.58	88.17
VIT_14s0108g00580.t01	Wine grape	cytosol	67.41	72.55
GSMUA_Achr10P...	Banana	mitochondrion	61.86	71.54
HORVU2Hr1G080310.2	Barley	extracellular	48.12	68.45
KRH18481	Soybean	plastid	67.85	66.67
PGSC0003DMT400017849	Potato	plastid	67.85	66.52
EES10940	Sorghum	plastid	64.52	65.25
Solyc02g067360.2.1	Tomato	plastid	67.18	65.16
Os04t0459900-01	Rice	plastid	62.75	63.6
TraesCS2A01G339400.1	Wheat	plastid	61.64	62.47
TraesCS2B01G342600.2	Wheat	plastid	61.64	62.47
TraesCS2D01G323700.1	Wheat	plastid	61.64	62.47
Zm00001d003426_P002	Maize	plastid	62.53	58.02
Bra025312.1-P	Field mustard	plastid	38.14	39.27
Bra013300.1-P	Field mustard	plastid	26.39	37.66

Protein Annotations

MapMan:19.4.2.3	Gene3D:2.30.42.10	Gene3D:2.40.10.10	EnsemblPlantsGene:Bra040850	EnsemblPlants:Bra040850.1	EnsemblPlants:Bra040850.1-P
GO:GO:0003674	GO:GO:0003824	GO:GO:0004252	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006091	GO:GO:0006508	GO:GO:0008150
GO:GO:0008152	GO:GO:0008233	GO:GO:0009507	GO:GO:0009534	GO:GO:0009536	GO:GO:0009543
GO:GO:0009579	GO:GO:0009987	GO:GO:0010206	GO:GO:0015979	GO:GO:0016787	GO:GO:0019538
GO:GO:0031977	InterPro:IPR001478	UniProt:M4FIC1	InterPro:PDZ	InterPro:PDZ_sf	PFAM:PF13180
PFAM:PF13365	PRINTS:PR00834	PANTHER:PTHR43343	PANTHER:PTHR43343:SF3	InterPro:Peptidase_S1C	InterPro:Peptidase_S1_PA
MEROPS:S01.474	SMART:SM00228	SUPFAM:SSF50156	SUPFAM:SSF50494	UniParc:UPI000253E96D	SEG:seg

Description

AT5G39830 (E=4e-217) DEGP8, DEG8 | DEG8; peptidase/ serine-type peptidase

Coordinates

chrScaffold000281:+:2104..4789

Molecular Weight (calculated)

47812.6 Da

IEP (calculated)

7.835

GRAVY (calculated)

0.053

Length

451 amino acids

Sequence
(BLAST)

001: MQVIASCSLR PDAFTPSEND FVGRRQLLSS ACSRISQGDV VSDRPASSVK IGRDWKSSLN ELAMKSVPRR IWLTSVFMNL CCNPSRYLSA LALGDPSVAT
101: VEDVIPPVVF PAGPLFPTEG RIVQLFEKNT YSVVNIFDVT LRPQLKMTGV VEIPEGNGSG VVWDEQGYIV TNYHVIGNAL SRNPSPGDVV GRVNILASDG
201: VQKNFEGKLV GADRAKDLAV LKVEAPETLL KPIRVGQSNS LKVGQQCLAI GNPFGFDHTL TVGVISGLNR DIFSQTGVTI GGGIQTDAAI NPGNSGGPLL
301: DSKGNLIGIN TAIYTQTGTS AGVGFAIPSS TVLKIVPQLI QFSKVLRAGI NIELAPDQVA NQLNVRNGAL VLQVPGDSLA AKAGLRPTSR GFAGNIVLGD
401: IIVAVDDKPV KSKAELMKVL DEYSVGDKVK LAIKRGSDDL ELQISLEEKS S

Best Arabidopsis Sequence Match ( AT5G39830.1 )
(BLAST)

001: MQVIASFCSK PNENEFVGRR QLLSSVCSKI SQGDVVSHPP VSSVKVTQDW KSNLHELAVK SVPSTTRRIL LTSLFMNLCF NPSRYLSALA LGDPSVATVE
101: DVSPTVFPAG PLFPTEGRIV QLFEKNTYSV VNIFDVTLRP QLKMTGVVEI PEGNGSGVVW DGQGYIVTNY HVIGNALSRN PSPGDVVGRV NILASDGVQK
201: NFEGKLVGAD RAKDLAVLKV DAPETLLKPI KVGQSNSLKV GQQCLAIGNP FGFDHTLTVG VISGLNRDIF SQTGVTIGGG IQTDAAINPG NSGGPLLDSK
301: GNLIGINTAI FTQTGTSAGV GFAIPSSTVL KIVPQLIQFS KVLRAGINIE LAPDPVANQL NVRNGALVLQ VPGKSLAEKA GLHPTSRGFA GNIVLGDIIV
401: AVDDKPVKNK AELMKILDEY SVGDKVTLKI KRGNEDLELK ISLEEKSS

Arabidopsis Description

DEGP8Protease Do-like 8, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LU10]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.