Factsheet for TraesCS2A01G339400.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G323700.1	Wheat	plastid	97.98	97.98
TraesCS2B01G342600.2	Wheat	plastid	97.98	97.98
HORVU2Hr1G080310.2	Barley	extracellular	63.6	89.27
EES10940	Sorghum	plastid	79.33	79.15
Os04t0459900-01	Rice	plastid	77.75	77.75
GSMUA_Achr10P...	Banana	mitochondrion	63.37	72.31
Zm00001d003426_P002	Maize	plastid	77.3	70.78
VIT_14s0108g00580.t01	Wine grape	cytosol	62.7	66.59
KRH18481	Soybean	plastid	68.31	66.23
AT5G39830.1	Thale cress	cytosol, plastid	64.04	63.62
Solyc02g067360.2.1	Tomato	plastid	64.72	61.94
CDY30272	Canola	plastid	62.47	61.78
Bra040850.1-P	Field mustard	plastid	62.47	61.64
CDX74425	Canola	plastid	62.47	61.64
PGSC0003DMT400017849	Potato	plastid	63.15	61.09
TraesCS1A01G408900.1	Wheat	plastid	34.16	41.42
TraesCS5A01G031100.1	Wheat	mitochondrion	27.64	39.94
TraesCS4A01G228900.1	Wheat	mitochondrion	22.92	23.94

Protein Annotations

MapMan:19.4.2.3	Gene3D:2.30.42.10	Gene3D:2.40.10.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0004252
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006091	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0009507
GO:GO:0009534	GO:GO:0009536	GO:GO:0009543	GO:GO:0009579	GO:GO:0009987	GO:GO:0010206
GO:GO:0015979	GO:GO:0016787	GO:GO:0019538	GO:GO:0031977	InterPro:IPR001478	InterPro:PDZ
InterPro:PDZ_sf	PFAM:PF13180	PFAM:PF13365	PRINTS:PR00834	PFscan:PS50106	PANTHER:PTHR43343
PANTHER:PTHR43343:SF3	InterPro:Peptidase_S1C	InterPro:Peptidase_S1_PA	SMART:SM00228	SUPFAM:SSF50156	SUPFAM:SSF50494
EnsemblPlantsGene:TraesCS2A01G339400	EnsemblPlants:TraesCS2A01G339400.1	TIGR:cd00987	SEG:seg	:	:

Description

No Description!

Coordinates

chr2A:-:573368434..573379698

Molecular Weight (calculated)

46626.5 Da

IEP (calculated)

8.281

GRAVY (calculated)

0.194

Length

445 amino acids

Sequence
(BLAST)

001: MHCLACAAPA AAAAARAPGR RFGRRRVVVD CIASADRNVE GTPPRLRETC ELSEISSKTL LFASKRKILA FSAFCLCLHS SRYLSALALG DPTVKIEDVT
101: PKIFPSGPLF PTEKRIAELF ETNTYSVVNI FDATLRPQLN VTGVVEIPEG NGSGVVWDES GHIVTNYHVV GNALSKNPKL GEVVARVNIL AAEGIQKNFE
201: GILIGADRAK DLAVLKVDAP SDILKPIIVG QSSALKVGQQ CLAIGNPFGF DHTLTVGVIS GLNRDIFSQA GVTIGGGIQT DAAINPGNSG GPLLDSKGHM
301: IGINTAIFTQ TGTSAGVGFA IQSSTILKIV PQLIQSGKVR RAGLNVEFAP DPIAYQLNVR DGALILKVPP GSTVEKAGLV PTGRGFAGNI VLGDVIVAVD
401: GKPIKGKSDL LRVLDDYGVG DTVTLTIRRG TETIPIALSL EDASV

Best Arabidopsis Sequence Match ( AT5G39830.1 )
(BLAST)

001: MQVIASFCSK PNENEFVGRR QLLSSVCSKI SQGDVVSHPP VSSVKVTQDW KSNLHELAVK SVPSTTRRIL LTSLFMNLCF NPSRYLSALA LGDPSVATVE
101: DVSPTVFPAG PLFPTEGRIV QLFEKNTYSV VNIFDVTLRP QLKMTGVVEI PEGNGSGVVW DGQGYIVTNY HVIGNALSRN PSPGDVVGRV NILASDGVQK
201: NFEGKLVGAD RAKDLAVLKV DAPETLLKPI KVGQSNSLKV GQQCLAIGNP FGFDHTLTVG VISGLNRDIF SQTGVTIGGG IQTDAAINPG NSGGPLLDSK
301: GNLIGINTAI FTQTGTSAGV GFAIPSSTVL KIVPQLIQFS KVLRAGINIE LAPDPVANQL NVRNGALVLQ VPGKSLAEKA GLHPTSRGFA GNIVLGDIIV
401: AVDDKPVKNK AELMKILDEY SVGDKVTLKI KRGNEDLELK ISLEEKSS

Arabidopsis Description

DEGP8Protease Do-like 8, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LU10]
SUBAcon: [cytosol,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.