Factsheet for GSMUA_Achr10P29800_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

extracellular 2
golgi 2
plasma membrane 2
endoplasmic reticulum 2
vacuole 2
plastid 3
mitochondrion 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_14s0108g00580.t01	Wine grape	cytosol	75.9	70.64
HORVU2Hr1G080310.2	Barley	extracellular	56.67	69.72
KRH18481	Soybean	plastid	76.92	65.36
Os04t0459900-01	Rice	plastid	74.1	64.94
EES10940	Sorghum	plastid	73.85	64.57
PGSC0003DMT400017849	Potato	plastid	75.9	64.35
Solyc02g067360.2.1	Tomato	plastid	76.67	64.3
AT5G39830.1	Thale cress	cytosol, plastid	73.08	63.62
TraesCS2D01G323700.1	Wheat	plastid	72.31	63.37
TraesCS2B01G342600.2	Wheat	plastid	72.31	63.37
TraesCS2A01G339400.1	Wheat	plastid	72.31	63.37
Bra040850.1-P	Field mustard	plastid	71.54	61.86
CDX74425	Canola	plastid	71.54	61.86
CDY30272	Canola	plastid	71.28	61.78
Zm00001d003426_P002	Maize	plastid	73.33	58.85
GSMUA_Achr1P13970_001	Banana	plastid	45.38	39.78
GSMUA_Achr9P08110_001	Banana	mitochondrion	26.92	24.36
GSMUA_Achr8P29040_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	20.0	22.87
GSMUA_Achr6P28780_001	Banana	mitochondrion	23.85	19.14

Protein Annotations

MapMan:19.4.2.3	Gene3D:2.30.42.10	Gene3D:2.40.10.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0004252
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006091	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0009507
GO:GO:0009534	GO:GO:0009536	GO:GO:0009543	GO:GO:0009579	GO:GO:0009987	GO:GO:0010206
GO:GO:0015979	GO:GO:0016787	GO:GO:0019538	GO:GO:0031977	EnsemblPlantsGene:GSMUA_Achr10G29800_001	EnsemblPlants:GSMUA_Achr10P29800_001
EnsemblPlants:GSMUA_Achr10T29800_001	InterPro:IPR001478	UniProt:M0RMK4	InterPro:PDZ	InterPro:PDZ_sf	PFAM:PF13180
PFAM:PF13365	PRINTS:PR00834	PANTHER:PTHR43343	PANTHER:PTHR43343:SF3	InterPro:Peptidase_S1C	InterPro:Peptidase_S1_PA
SMART:SM00228	SUPFAM:SSF50156	SUPFAM:SSF50494	UniParc:UPI000295064B	:	:

Description

Protease Do-like 8, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr10G29800_001]

Coordinates

chr10:+:32172588..32178983

Molecular Weight (calculated)

41397.2 Da

IEP (calculated)

7.574

GRAVY (calculated)

0.197

Length

390 amino acids

Sequence
(BLAST)

001: MKTVFPFTSR RMLFAGSTVW FCLHTSKYFP ALALEEPSIT TEDVTPRVFL SGPLFPSEER TVEIFEKNTY SVVNIFDVTL RPRLNATGVV EVPEGNGSGV
101: VWDKFGHIVT NYHVVGNALS KNPNPDQVVA RVNILVAEGV QKTFEGRLIG ANRAKDLAVL KVDASADLLK PINVGQSSVL RVGQQCLAIG NPFGFDHTLT
201: VGVISGLNRD IVSKTGVTIG GGIQTDAAIN PGNSGGPLLD SKGNMIGINT AIFTNTGASA GVGFAIPSST VLRIVPQLIQ FGKVVRAGLN MEIAPDLVAN
301: QLNVRNGALV LQIPENSVAA KAGLLPTTRG LAGNIVLGDV IVAVDNKPVR SKADLLKILD EYNVGNTVLL KIQRGSENLD LPVVLEETSI

Best Arabidopsis Sequence Match ( AT5G39830.1 )
(BLAST)

001: MQVIASFCSK PNENEFVGRR QLLSSVCSKI SQGDVVSHPP VSSVKVTQDW KSNLHELAVK SVPSTTRRIL LTSLFMNLCF NPSRYLSALA LGDPSVATVE
101: DVSPTVFPAG PLFPTEGRIV QLFEKNTYSV VNIFDVTLRP QLKMTGVVEI PEGNGSGVVW DGQGYIVTNY HVIGNALSRN PSPGDVVGRV NILASDGVQK
201: NFEGKLVGAD RAKDLAVLKV DAPETLLKPI KVGQSNSLKV GQQCLAIGNP FGFDHTLTVG VISGLNRDIF SQTGVTIGGG IQTDAAINPG NSGGPLLDSK
301: GNLIGINTAI FTQTGTSAGV GFAIPSSTVL KIVPQLIQFS KVLRAGINIE LAPDPVANQL NVRNGALVLQ VPGKSLAEKA GLHPTSRGFA GNIVLGDIIV
401: AVDDKPVKNK AELMKILDEY SVGDKVTLKI KRGNEDLELK ISLEEKSS

Arabidopsis Description

DEGP8Protease Do-like 8, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LU10]
SUBAcon: [cytosol,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.