Factsheet for GSMUA_Achr8P29040_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol, peroxisome, golgi, plasma membrane, vacuole, endoplasmic reticulum, plastid

Predictor Summary:

cytosol 2
extracellular 3
golgi 3
plasma membrane 3
endoplasmic reticulum 3
vacuole 3
plastid 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid, secretory
Any Predictor:	cytosol, peroxisome, plastid, secretory
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P08110_001	Banana	mitochondrion	61.29	48.49
HORVU4Hr1G014960.11	Barley	plastid	53.08	46.41
TraesCS4B01G087500.1	Wheat	mitochondrion	52.49	42.42
Zm00001d049018_P001	Maize	mitochondrion	52.79	42.15
TraesCS4A01G228900.1	Wheat	mitochondrion	52.49	42.02
OQU83155	Sorghum	mitochondrion	52.49	41.82
VIT_14s0060g02370.t01	Wine grape	mitochondrion	50.44	39.91
AT5G27660.2	Thale cress	mitochondrion	50.73	39.77
KRG96820	Soybean	mitochondrion	48.97	39.11
CDX80635	Canola	mitochondrion, plastid	48.39	38.64
TraesCS4D01G084800.2	Wheat	cytosol	52.49	38.49
GSMUA_Achr6P28780_001	Banana	mitochondrion	54.55	38.27
CDX86147	Canola	plastid	48.39	37.59
Os11t0246600-00	Rice	mitochondrion	48.68	37.56
GSMUA_Achr10P...	Banana	mitochondrion	22.87	20.0
GSMUA_Achr1P13970_001	Banana	plastid	23.17	17.75

Protein Annotations

MapMan:19.4.2.3	Gene3D:2.30.42.10	Gene3D:2.40.10.120	GO:GO:0003674	GO:GO:0003824	GO:GO:0004252
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr8G29040_001	EnsemblPlants:GSMUA_Achr8P29040_001
EnsemblPlants:GSMUA_Achr8T29040_001	InterPro:IPR001478	UniProt:M0TUK7	InterPro:PDZ	InterPro:PDZ_sf	PFAM:PF13180
PFAM:PF13365	PRINTS:PR00834	PANTHER:PTHR22939	PANTHER:PTHR22939:SF109	InterPro:Peptidase_S1C	InterPro:Peptidase_S1_PA
SMART:SM00228	SUPFAM:SSF50156	SUPFAM:SSF50494	TMHMM:TMhelix	UniParc:UPI000296A732	SEG:seg

Description

Putative protease Do-like 14 [Source:GMGC_GENE;Acc:GSMUA_Achr8G29040_001]

Coordinates

chr8:-:31607907..31612952

Molecular Weight (calculated)

36744.3 Da

IEP (calculated)

5.054

GRAVY (calculated)

0.092

Length

341 amino acids

Sequence
(BLAST)

001: MQSDTIAKAA AAACPALVHV SFLQNISVGP YGSGTIIDPD GTILTSASCV AESLNSRKVS KSKIGVTLQD GREFEGTVVI ADFLSDIAIV KIQSETPLPT
101: ARIGSSSKIR PGDQVIALGT PQALQNTITS GIVSCTDRDS NDLGLGSVRR EHLPTDFFHC YNANGSLGGP LVNLDGEVVG VNTADGMSFA VPIDIVMKSI
201: EQFEKNEYVL YWFGCSYLIL LLTSLWLFTL DLKIAHFKKK DASFPDVIKG VQVLVVNPGS PAHHAGFRPG DVVIEFDKKP VGTAKEIIDI MEDQVGKTLE
301: VLIKRADNTS MTLTVMPKEA KTMIDLPQEM LEDFSTKTVL R

Best Arabidopsis Sequence Match ( AT5G27660.2 )
(BLAST)

001: MMNFLRRAVS SSKRSELIRI ISVATATSGI LYASTNPDAR TRVSLAIPES VRESLSLLPW QISPGLIHRP EQSLFGNFVF SSRVSPKSEA PINDEKGVSV
101: EASDSSSKPS NGYLGRDTIA NAAARIGPAV VNLSVPQGFH GISMGKSIGS GTIIDADGTI LTCAHVVVDF QNIRHSSKGR VDVTLQDGRT FEGVVVNADL
201: QSDIALVKIK SKTPLPTAKL GFSSKLRPGD WVIAVGCPLS LQNTVTAGIV SCVDRKSSDL GLGGKHREYL QTDCSINAGN SGGPLVNLDG EVIGVNIMKV
301: LAADGLGFSV PIDSVSKIIE HFKKSGRVIR PWIGLKMVEL NNLIVAQLKE RDPMFPDVER GVLVPTVIPG SPADRAGFKP GDVVVRFDGK PVETIKEVIE
401: IMDDRVGKRM QVVVERSNKE RVTLEVIPEE ANPDM

Arabidopsis Description

Trypsin family protein with PDZ domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8BBM9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.