CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
cytosol 1
mitochondrion 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d049018_P001	Maize	mitochondrion	85.28	85.48
HORVU4Hr1G014960.11	Barley	plastid	69.39	76.15
TraesCS4B01G087500.1	Wheat	mitochondrion	69.16	70.14
TraesCS4A01G228900.1	Wheat	mitochondrion	68.22	68.54
Os11t0246600-00	Rice	mitochondrion	65.89	63.8
GSMUA_Achr9P08110_001	Banana	mitochondrion	62.38	61.95
TraesCS4D01G084800.2	Wheat	cytosol	66.36	61.08
AT5G27660.2	Thale cress	mitochondrion	57.01	56.09
KRG96820	Soybean	mitochondrion	55.84	55.97
VIT_14s0060g02370.t01	Wine grape	mitochondrion	55.14	54.76
CDX80635	Canola	mitochondrion, plastid	53.74	53.86
CDX86147	Canola	plastid	54.44	53.08
GSMUA_Achr8P29040_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	41.82	52.49
GSMUA_Achr6P28780_001	Banana	mitochondrion	50.47	44.44
EES16390	Sorghum	plastid	18.46	25.65
EES10940	Sorghum	plastid	25.93	24.89
OQU78439	Sorghum	plastid	24.77	24.48

Protein Annotations

MapMan:19.4.2.3	Gene3D:2.30.42.10	Gene3D:2.40.10.120	EntrezGene:8057143	UniProt:C5Y7R8	ProteinID:EES09542.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0004252	GO:GO:0005488	GO:GO:0005515	GO:GO:0006508
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0019538	InterPro:IPR001478	ProteinID:KXG28099.1
EnsemblPlants:OQU83155	ProteinID:OQU83155	ProteinID:OQU83155.1	InterPro:PDZ	InterPro:PDZ_sf	PFAM:PF13180
PFAM:PF13365	PRINTS:PR00834	PFscan:PS50106	PANTHER:PTHR22939	PANTHER:PTHR22939:SF109	InterPro:Peptidase_S1C
InterPro:Peptidase_S1_PA	SMART:SM00228	EnsemblPlantsGene:SORBI_3005G084900	SUPFAM:SSF50156	SUPFAM:SSF50494	unigene:Sbi.18625
SignalP:SignalP-noTM	UniParc:UPI0001A868E8	RefSeq:XP_002450554.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr5:-:11578446..11584617

Molecular Weight (calculated)

45145.6 Da

IEP (calculated)

8.641

GRAVY (calculated)

0.082

Length

428 amino acids

Sequence
(BLAST)

001: MLLRCGRRAA LLLAAAAALS RGRDPDTAVY ASVSPPQTLR QALPTAAPAA EGLRSGARLF SPWLLPYPYQ GFPILNTFAS ASVSPANDRD QGSDGSSCDS
101: RCCPGCLGRN SIAKAASAVG PAVVNISSMH DMHGWVQEQS IGSGTIIDPD GTILTCAHVV ADFQSTKAIV RRKVSVTLQD GREFEGVVLN ADRVSDIAVV
201: KIKSATPLPA ARLGSSSRLQ PGDWVVAVGC PLSLQNTVTA GIVSCVDRKS SDLGLGGLRR EYLQTDCAIN KGNSGGPLVN LDGEIIGVNV MKVWNADGLS
301: FAVPIDSVIK IVENFKKNGR VVRPWLGLKM LDLNPMIIAQ LKEKSSTFPD VRKGVLVPMV TPASPAEQAG FRPGDVVVEF GGKPVESIKE IIDIMGDKVG
401: VPFKVLVKRA SNVTVTLTVI PEEADASR

Best Arabidopsis Sequence Match ( AT5G27660.2 )
(BLAST)

001: MMNFLRRAVS SSKRSELIRI ISVATATSGI LYASTNPDAR TRVSLAIPES VRESLSLLPW QISPGLIHRP EQSLFGNFVF SSRVSPKSEA PINDEKGVSV
101: EASDSSSKPS NGYLGRDTIA NAAARIGPAV VNLSVPQGFH GISMGKSIGS GTIIDADGTI LTCAHVVVDF QNIRHSSKGR VDVTLQDGRT FEGVVVNADL
201: QSDIALVKIK SKTPLPTAKL GFSSKLRPGD WVIAVGCPLS LQNTVTAGIV SCVDRKSSDL GLGGKHREYL QTDCSINAGN SGGPLVNLDG EVIGVNIMKV
301: LAADGLGFSV PIDSVSKIIE HFKKSGRVIR PWIGLKMVEL NNLIVAQLKE RDPMFPDVER GVLVPTVIPG SPADRAGFKP GDVVVRFDGK PVETIKEVIE
401: IMDDRVGKRM QVVVERSNKE RVTLEVIPEE ANPDM

Arabidopsis Description

Trypsin family protein with PDZ domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8BBM9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.