CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G089820.2	Barley	plastid	78.06	88.71
Zm00001d009613_P001	Maize	plastid	88.68	83.3
Os05t0568900-01	Rice	plastid	82.91	82.15
TraesCS1A01G408900.1	Wheat	plastid	69.52	82.02
TraesCS1B01G437600.1	Wheat	plastid	79.91	81.22
TraesCS1D01G416000.1	Wheat	plastid	79.68	80.42
Zm00001d039059_P001	Maize	plastid	84.99	76.51
CDY58511	Canola	plastid	75.29	74.94
KRH56605	Soybean	plastid	72.75	73.94
KRG93298	Soybean	nucleus, plastid	73.21	73.55
Bra025312.1-P	Field mustard	plastid	74.36	73.52
CDX86460	Canola	plastid	74.36	73.52
VIT_18s0072g00970.t01	Wine grape	plastid	72.52	73.36
GSMUA_Achr1P13970_001	Banana	plastid	75.29	73.26
HORVU3Hr1G101230.2	Barley	plastid	49.42	71.57
AT3G27925.1	Thale cress	plastid	72.52	71.53
Solyc02g086830.2.1	Tomato	plastid	70.9	71.4
PGSC0003DMT400001298	Potato	plastid	70.44	70.93
Zm00001d020604_P001	Maize	plastid	30.48	52.38
EES16390	Sorghum	plastid	29.33	41.23
EES10940	Sorghum	plastid	39.49	38.34
OQU83155	Sorghum	mitochondrion	24.48	24.77

Protein Annotations

MapMan:19.4.2.3	Gene3D:2.30.42.10	Gene3D:2.40.10.10	UniProt:A0A1Z5R4G7	GO:GO:0003674	GO:GO:0003824
GO:GO:0004252	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0006091	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152
GO:GO:0008236	GO:GO:0009507	GO:GO:0009534	GO:GO:0009535	GO:GO:0009536	GO:GO:0009579
GO:GO:0009719	GO:GO:0009735	GO:GO:0009987	GO:GO:0010206	GO:GO:0015979	GO:GO:0016020
GO:GO:0016787	GO:GO:0019538	GO:GO:0031977	GO:GO:0042802	InterPro:IPR001478	EnsemblPlants:OQU78439
ProteinID:OQU78439	ProteinID:OQU78439.1	InterPro:PDZ	InterPro:PDZ_sf	PFAM:PF13180	PFAM:PF13365
PRINTS:PR00834	PFscan:PS50106	PANTHER:PTHR43019	PANTHER:PTHR43019:SF4	InterPro:Peptidase_S1C	InterPro:Peptidase_S1_PA
SMART:SM00228	EnsemblPlantsGene:SORBI_3009G237000	SUPFAM:SSF50156	SUPFAM:SSF50494	UniParc:UPI000B424DF0	SEG:seg

Description

hypothetical protein

Coordinates

chr9:-:57534371..57539168

Molecular Weight (calculated)

44868.8 Da

IEP (calculated)

9.019

GRAVY (calculated)

0.100

Length

433 amino acids

Sequence
(BLAST)

001: MAAAAAAASS SAAACFLSPL PPPRRPRHFL RHLARAAATK PAPAPAPASA SSPWPWARRL GSLVPGETAG RLLSSAAGSL IVALASASLV LGDAGAASAF
101: VVSTPRKLQA DELATVRLFQ ENTPSVVYIT NLAVRQDAFT LDVLEVPQGS GSGFVWDKSG HIVTNFHVIR GASDLRVTLA DQSVYEAQVV GFDQDKDVAV
201: LRIKAPKDKL RPIPVGVSAD LLVGQKVYAI GNPFGLDHTL TTGVISGLRR EISSAATGRP IQDVIQTDAA INPGNSGGPL LDSSGNLIGV NTAIYSPSGA
301: SSGVGFSIPV DTVGGIVDQL IKFGKVTRPI LGIKFAPDQS VEQLGLSGVL VLDAPPNGPA GKAGLQSTKR DPYGRLILGD IITSVNGTKV TNGSDLYRIL
401: DQCKVGETVT VEVLRGDHKE KIPVVLEPKA DES

Best Arabidopsis Sequence Match ( AT3G27925.1 )
(BLAST)

001: MATTTSCSLL LSSTLFLHSP PSSHLSFFNL SSSRSSPISL YPIRSKRYFR ILSKLSLNDN NRDDDDDTLH FTPFSAVKPF FLLCTSVALS FSLFAASPAV
101: ESASAFVVST PKKLQTDELA TVRLFQENTP SVVYITNLAV RQDAFTLDVL EVPQGSGSGF VWDKQGHIVT NYHVIRGASD LRVTLADQTT FDAKVVGFDQ
201: DKDVAVLRID APKNKLRPIP VGVSADLLVG QKVFAIGNPF GLDHTLTTGV ISGLRREISS AATGRPIQDV IQTDAAINPG NSGGPLLDSS GTLIGINTAI
301: YSPSGASSGV GFSIPVDTVG GIVDQLVRFG KVTRPILGIK FAPDQSVEQL GVSGVLVLDA PPSGPAGKAG LQSTKRDGYG RLVLGDIITS VNGTKVSNGS
401: DLYRILDQCK VGDEVTVEVL RGDHKEKISV TLEPKPDES

Arabidopsis Description

DEGP1DEGP1 [Source:UniProtKB/TrEMBL;Acc:A0A178V823]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.