Factsheet for Zm00001d020604_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G101230.2	Barley	plastid	44.44	37.46
TraesCS1A01G408900.1	Wheat	plastid	52.38	35.97
Zm00001d009613_P001	Maize	plastid	57.54	31.45
OQU78439	Sorghum	plastid	52.38	30.48
TraesCS1B01G437600.1	Wheat	plastid	47.62	28.17
HORVU1Hr1G089820.2	Barley	plastid	42.46	28.08
CDX86460	Canola	plastid	48.41	27.85
Bra025312.1-P	Field mustard	plastid	48.41	27.85
TraesCS1D01G416000.1	Wheat	plastid	46.43	27.27
KRG93298	Soybean	nucleus, plastid	46.43	27.15
VIT_18s0072g00970.t01	Wine grape	plastid	46.03	27.1
KRH56605	Soybean	plastid	45.24	26.76
GSMUA_Achr1P13970_001	Banana	plastid	47.22	26.74
Zm00001d039059_P001	Maize	plastid	50.79	26.61
AT3G27925.1	Thale cress	plastid	46.03	26.42
Os05t0568900-01	Rice	plastid	45.63	26.32
CDY58511	Canola	plastid	45.24	26.21
Solyc02g086830.2.1	Tomato	plastid	42.06	24.65
PGSC0003DMT400001298	Potato	plastid	40.48	23.72
Zm00001d000230_P002	Maize	plastid	22.62	18.45
Zm00001d003426_P002	Maize	plastid	24.6	12.76
Zm00001d049018_P001	Maize	mitochondrion	17.06	10.07

Protein Annotations

EnsemblPlants:Zm00001d020604_P001	EnsemblPlants:Zm00001d020604_T001	EnsemblPlantsGene:Zm00001d020604	Gene3D:2.40.10.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0016787	GO:GO:0019538
InterPro:Peptidase_S1_PA	PANTHER:PTHR43019	PANTHER:PTHR43019:SF3	PFAM:PF13365	ProteinID:ONM55245.1	SEG:seg
SUPFAM:SSF50494	UniParc:UPI000842F894	UniProt:A0A1D6I553	MapMan:19.4.2.3	:	:

Description

Protease Do-like 1 chloroplastic

Coordinates

chr7:+:124465020..124467665

Molecular Weight (calculated)

27152.0 Da

IEP (calculated)

8.633

GRAVY (calculated)

0.369

Length

252 amino acids

Sequence
(BLAST)

001: MVAPSSAATA CFVSPLPPPR RPRHFLRHLA RAAVAEPTPA PASASSLAHP SPWPWAQRLC DLVPTEAVGR LLSSVVGSLI VALAFASLIL GDTDAASAFV
101: VSTPRKLQAD ELATVRLFQE NTPSVVYITN LAVRQDAFTL DVLEVTQGSG SGFVWDKSGH IVTNFHVIRG ASDLRLVGTT ECFMLSYYTF LVVWLCSNRS
201: LSILVLMDKD VVVLRIKAPK DKLRPIPVGV SADLLVGQKV YAIGNPAYTD LF

Best Arabidopsis Sequence Match ( AT3G27925.1 )
(BLAST)

001: MATTTSCSLL LSSTLFLHSP PSSHLSFFNL SSSRSSPISL YPIRSKRYFR ILSKLSLNDN NRDDDDDTLH FTPFSAVKPF FLLCTSVALS FSLFAASPAV
101: ESASAFVVST PKKLQTDELA TVRLFQENTP SVVYITNLAV RQDAFTLDVL EVPQGSGSGF VWDKQGHIVT NYHVIRGASD LRVTLADQTT FDAKVVGFDQ
201: DKDVAVLRID APKNKLRPIP VGVSADLLVG QKVFAIGNPF GLDHTLTTGV ISGLRREISS AATGRPIQDV IQTDAAINPG NSGGPLLDSS GTLIGINTAI
301: YSPSGASSGV GFSIPVDTVG GIVDQLVRFG KVTRPILGIK FAPDQSVEQL GVSGVLVLDA PPSGPAGKAG LQSTKRDGYG RLVLGDIITS VNGTKVSNGS
401: DLYRILDQCK VGDEVTVEVL RGDHKEKISV TLEPKPDES

Arabidopsis Description

DEGP1DEGP1 [Source:UniProtKB/TrEMBL;Acc:A0A178V823]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.