CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra025312.1-P	Field mustard	plastid	100.0	100.0
CDY58511	Canola	plastid	84.25	84.83
AT3G27925.1	Thale cress	plastid	83.56	83.37
HORVU1Hr1G089820.2	Barley	plastid	70.09	80.58
VIT_18s0072g00970.t01	Wine grape	plastid	76.26	78.04
KRG93298	Soybean	nucleus, plastid	75.57	76.8
KRH56605	Soybean	plastid	73.74	75.82
TraesCS1B01G437600.1	Wheat	plastid	72.37	74.41
OQU78439	Sorghum	plastid	73.52	74.36
TraesCS1D01G416000.1	Wheat	plastid	72.6	74.13
TraesCS1A01G408900.1	Wheat	plastid	61.64	73.57
Os05t0568900-01	Rice	plastid	73.29	73.46
PGSC0003DMT400001298	Potato	plastid	71.92	73.26
Solyc02g086830.2.1	Tomato	plastid	71.46	72.79
GSMUA_Achr1P13970_001	Banana	plastid	71.92	70.79
Zm00001d009613_P001	Maize	plastid	72.83	69.2
Zm00001d039059_P001	Maize	plastid	72.15	65.7
HORVU3Hr1G101230.2	Barley	plastid	41.32	60.54
Zm00001d020604_P001	Maize	plastid	27.85	48.41
CDX78844	Canola	plastid	27.85	38.61
CDX74425	Canola	plastid	39.27	38.14
CDY30272	Canola	plastid	38.81	37.78
CDX99473	Canola	plastid	26.94	37.58
CDY65943	Canola	cytosol, extracellular, plastid	11.19	33.33
CDX80635	Canola	mitochondrion, plastid	22.83	23.42
CDX86147	Canola	plastid	22.37	22.32
CDY07792	Canola	mitochondrion	16.44	19.83

Protein Annotations

MapMan:19.4.2.3	Gene3D:2.30.42.10	Gene3D:2.40.10.10	GO:A0A078DB31	EnsemblPlants:CDX86460	ProteinID:CDX86460
ProteinID:CDX86460.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004252	GO:GO:0005488	GO:GO:0005515
GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00144609001
InterPro:IPR001478	InterPro:PDZ	InterPro:PDZ_sf	PFAM:PF13180	PFAM:PF13365	PRINTS:PR00834
PFscan:PS50106	PANTHER:PTHR43019	PANTHER:PTHR43019:SF4	InterPro:Peptidase_S1C	InterPro:Peptidase_S1_PA	SMART:SM00228
SUPFAM:SSF50156	SUPFAM:SSF50494	UniParc:UPI000253FC2C	SEG:seg	:	:

Description

BnaA06g31770D

Coordinates

chrLK031845:+:1675772..1678630

Molecular Weight (calculated)

46330.4 Da

IEP (calculated)

6.374

GRAVY (calculated)

0.040

Length

438 amino acids

Sequence
(BLAST)

001: MATTSSLLLS TLFLHSPPPP SSSRFSNGSF FNPSPRSLSL YPVRSKRCLR ILSKLPLDDT DNDDSPLLPR LSAAAVKPFL LLCTSVALSF SLFAASPAVE
101: SAAAFVVTTP RKLQTDELAT VRLFQENTPS VVYITNLAVR QDAFTLDVLE VPQGSGSGFV WDKQGHIVTN YHVIRGASDL RVTLADQSTY DAKVVGFDQD
201: KDVAVLRIDA PKDKLRPIPV GVSADLLVGQ KVFAIGNPFG LDHTLTTGVI SGLRREISSA ATGRPIQDVI QTDAAINPGN SGGPLLDSSG TLIGINTAIY
301: SPSGASSGVG FSIPVDTVGG IVDQLVRFGK VTRPILGIKF APDQSVEQLG VSGVLVLDAP PTGPAGKAGL QSTKRDGYGR LILGDIITSV NGTKVTNGSD
401: LYRILDQCKV GDEVTVEVLR GDHKEKISVT LEPKPDET

Best Arabidopsis Sequence Match ( AT3G27925.1 )
(BLAST)

001: MATTTSCSLL LSSTLFLHSP PSSHLSFFNL SSSRSSPISL YPIRSKRYFR ILSKLSLNDN NRDDDDDTLH FTPFSAVKPF FLLCTSVALS FSLFAASPAV
101: ESASAFVVST PKKLQTDELA TVRLFQENTP SVVYITNLAV RQDAFTLDVL EVPQGSGSGF VWDKQGHIVT NYHVIRGASD LRVTLADQTT FDAKVVGFDQ
201: DKDVAVLRID APKNKLRPIP VGVSADLLVG QKVFAIGNPF GLDHTLTTGV ISGLRREISS AATGRPIQDV IQTDAAINPG NSGGPLLDSS GTLIGINTAI
301: YSPSGASSGV GFSIPVDTVG GIVDQLVRFG KVTRPILGIK FAPDQSVEQL GVSGVLVLDA PPSGPAGKAG LQSTKRDGYG RLVLGDIITS VNGTKVSNGS
401: DLYRILDQCK VGDEVTVEVL RGDHKEKISV TLEPKPDES

Arabidopsis Description

DEGP1DEGP1 [Source:UniProtKB/TrEMBL;Acc:A0A178V823]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.