Factsheet for HORVU4Hr1G014960.11

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
TargetP:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G087500.1	Wheat	mitochondrion	89.23	82.46
TraesCS4A01G228900.1	Wheat	mitochondrion	83.33	76.29
OQU83155	Sorghum	mitochondrion	76.15	69.39
Zm00001d049018_P001	Maize	mitochondrion	75.9	69.32
TraesCS4D01G084800.2	Wheat	cytosol	81.03	67.96
GSMUA_Achr9P08110_001	Banana	mitochondrion	66.67	60.32
Os11t0246600-00	Rice	mitochondrion	67.95	59.95
VIT_14s0060g02370.t01	Wine grape	mitochondrion	61.03	55.22
AT5G27660.2	Thale cress	mitochondrion	61.54	55.17
CDX80635	Canola	mitochondrion, plastid	60.26	55.04
KRG96820	Soybean	mitochondrion	60.0	54.8
CDX86147	Canola	plastid	60.0	53.3
GSMUA_Achr8P29040_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	46.41	53.08
GSMUA_Achr6P28780_001	Banana	mitochondrion	56.15	45.06
HORVU1Hr1G089820.2	Barley	plastid	26.15	26.77
HORVU5Hr1G008160.5	Barley	mitochondrion	21.54	25.0
HORVU2Hr1G080310.2	Barley	extracellular	18.21	22.4
HORVU3Hr1G101230.2	Barley	plastid	15.9	20.74

Protein Annotations

MapMan:19.4.2.3	Gene3D:2.30.42.10	Gene3D:2.40.10.120	UniProt:A0A287NBS4	GO:GO:0003674	GO:GO:0003824
GO:GO:0004252	GO:GO:0005488	GO:GO:0005515	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152
GO:GO:0016787	GO:GO:0019538	EnsemblPlantsGene:HORVU4Hr1G014960	EnsemblPlants:HORVU4Hr1G014960.11	InterPro:IPR001478	InterPro:PDZ
InterPro:PDZ_sf	PFAM:PF13180	PFAM:PF13365	PRINTS:PR00834	PFscan:PS50106	PANTHER:PTHR22939
PANTHER:PTHR22939:SF109	InterPro:Peptidase_S1C	InterPro:Peptidase_S1_PA	SMART:SM00228	SUPFAM:SSF50156	SUPFAM:SSF50494
UniParc:UPI000B4805DD	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr4H:+:56094147..56101533

Molecular Weight (calculated)

40921.6 Da

IEP (calculated)

8.329

GRAVY (calculated)

0.139

Length

390 amino acids

Sequence
(BLAST)

001: SVTVSASAPL RHLLSTAATG LLSRNPFLAP WQGDFAILNS FACASAPPAN LSNHGSGGNS DDSRCSPGCL GRNSIANAAA AVGPAVVNIS CMQENGWVLE
101: KSIGSGTIID PDGTILTCAH VVADFQSTKP VLKGKVSVSL QDGREFEGVV LNFDIHSDIA VVKIKSKTPL PAARLGSSCK LRPGDWVVAL GCPLSLQNTV
201: TAGIVSCVDR KSSDLGLGGI RREYLQTNCA INIGNSGGPL VNLDGEIIGV NVMKVRAADG LSFSVPIDYV VKIVEHFKKN GRVVRPWLGL KMLDLNPMVI
301: AQLKERSSSF PDVSKGVLVP MVTPGSPAER AGFAPGDVVI EFDGKPVETI KEIIGIMGDK VGVPFKVLVR RANNVPVTLT VTPEEADARR

Best Arabidopsis Sequence Match ( AT5G27660.2 )
(BLAST)

001: MMNFLRRAVS SSKRSELIRI ISVATATSGI LYASTNPDAR TRVSLAIPES VRESLSLLPW QISPGLIHRP EQSLFGNFVF SSRVSPKSEA PINDEKGVSV
101: EASDSSSKPS NGYLGRDTIA NAAARIGPAV VNLSVPQGFH GISMGKSIGS GTIIDADGTI LTCAHVVVDF QNIRHSSKGR VDVTLQDGRT FEGVVVNADL
201: QSDIALVKIK SKTPLPTAKL GFSSKLRPGD WVIAVGCPLS LQNTVTAGIV SCVDRKSSDL GLGGKHREYL QTDCSINAGN SGGPLVNLDG EVIGVNIMKV
301: LAADGLGFSV PIDSVSKIIE HFKKSGRVIR PWIGLKMVEL NNLIVAQLKE RDPMFPDVER GVLVPTVIPG SPADRAGFKP GDVVVRFDGK PVETIKEVIE
401: IMDDRVGKRM QVVVERSNKE RVTLEVIPEE ANPDM

Arabidopsis Description

Trypsin family protein with PDZ domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8BBM9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.