CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
vacuole 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH11171	Soybean	plastid	83.55	90.39
VIT_10s0003g03850.t01	Wine grape	cytosol, peroxisome, plastid	66.12	86.27
PGSC0003DMT400076806	Potato	plastid	63.49	63.91
Solyc08g048550.2.1	Tomato	plastid	62.83	62.42
CDX99473	Canola	plastid	63.49	61.47
CDX78844	Canola	plastid	63.49	61.08
Bra013300.1-P	Field mustard	plastid	63.16	60.76
TraesCS5B01G030700.1	Wheat	mitochondrion, plastid, vacuole	61.18	60.59
TraesCS5D01G039300.1	Wheat	mitochondrion	61.51	60.13
EES16390	Sorghum	plastid	60.2	59.42
TraesCS5A01G031100.1	Wheat	mitochondrion	59.54	58.77
AT4G18370.1	Thale cress	plastid	62.17	58.51
Zm00001d000230_P002	Maize	plastid	58.22	57.28
HORVU5Hr1G008160.5	Barley	mitochondrion	59.87	54.17
VIT_00s1463g00010.t01	Wine grape	plastid	17.11	39.39
Os12t0616600-01	Rice	plastid, vacuole	17.43	33.97
KRH56605	Soybean	plastid	37.83	27.0
KRG93298	Soybean	nucleus, plastid	37.83	26.68
KRH18481	Soybean	plastid	38.82	25.71
KRG96820	Soybean	mitochondrion	25.0	17.8

Protein Annotations

EntrezGene:100787248	MapMan:19.4.2.3	Gene3D:2.40.10.10	EMBL:ACUP02008337	EnsemblPlantsGene:GLYMA_13G219400	GO:GO:0003674
GO:GO:0003824	GO:GO:0004252	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
GO:GO:0019538	UniProt:K7M141	EnsemblPlants:KRH21081	ProteinID:KRH21081	ProteinID:KRH21081.1	PFAM:PF13365
PRINTS:PR00834	PANTHER:PTHR43019	PANTHER:PTHR43019:SF3	InterPro:Peptidase_S1C	InterPro:Peptidase_S1_PA	MEROPS:S01.441
SUPFAM:SSF50494	UniParc:UPI000233C609	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr13:+:33256710..33260973

Molecular Weight (calculated)

32459.5 Da

IEP (calculated)

5.643

GRAVY (calculated)

-0.064

Length

304 amino acids

Sequence
(BLAST)

001: MALFSLQNNL FPLPLPTTPS STKSFPSVTT RRATIFGSSL VLLNSTPPTL AQQLPNDHDE LQQQEDHLVQ LFQDASLSVV FIKDLELTKV PKSSSKGAML
101: NDDEDAKVEG TGSGFIWDKF GHIVTNYHVV AKLATDTSGL QRCKVFLVDA KGNSFDREGK IIGFDPAYDL AVLKVDVDGY EIKPVVLGQS NDLRVGQSCF
201: AIGNPYGYEN TLTTGVVSGL GREIPSPNGG AIRGAIQTDA AINAGNSGGP LIDSYGHVVG VNTATFTKKG TGVSSGVNFA IPIDTVVRTV PYLIVYGTPY
301: SNRF

Best Arabidopsis Sequence Match ( AT4G18370.1 )
(BLAST)

001: MTMALASSKA FSSIFNTLSP INQSKFVLAC SGSNHVDVID RRRRIMIFGS SLALTSSLLG SNQQRLPMES AIALEQFKEK EEELEEEEER NVNLFQKTSP
101: SVVYIEAIEL PKTSSGDILT DEENGKIEGT GSGFVWDKLG HIVTNYHVIA KLATDQFGLQ RCKVSLVDAK GTRFSKEGKI VGLDPDNDLA VLKIETEGRE
201: LNPVVLGTSN DLRVGQSCFA IGNPYGYENT LTIGVVSGLG REIPSPNGKS ISEAIQTDAD INSGNSGGPL LDSYGHTIGV NTATFTRKGS GMSSGVNFAI
301: PIDTVVRTVP YLIVYGTAYR DRF

Arabidopsis Description

DEGP5Protease Do-like 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SEL7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.