Factsheet for TraesCS5B01G030700.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole, plastid, mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
vacuole 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G039300.1	Wheat	mitochondrion	94.79	93.57
TraesCS5A01G031100.1	Wheat	mitochondrion	90.55	90.26
HORVU5Hr1G008160.5	Barley	mitochondrion	90.55	82.74
EES16390	Sorghum	plastid	77.52	77.27
VIT_00s1450g00010.t01	Wine grape	cytosol, peroxisome	40.07	76.88
Zm00001d000230_P002	Maize	plastid	73.62	73.14
VIT_10s0003g03850.t01	Wine grape	cytosol, peroxisome, plastid	53.75	70.82
KRH21081	Soybean	plastid	60.59	61.18
KRH11171	Soybean	plastid	54.72	59.79
PGSC0003DMT400076806	Potato	plastid	54.07	54.97
Solyc08g048550.2.1	Tomato	plastid	52.44	52.61
CDX99473	Canola	plastid	53.09	51.91
CDX78844	Canola	plastid	53.09	51.58
Bra013300.1-P	Field mustard	plastid	53.09	51.58
Os12t0616600-01	Rice	plastid, vacuole	25.73	50.64
AT4G18370.1	Thale cress	plastid	53.09	50.46
TraesCS1B01G437600.1	Wheat	plastid	42.35	30.52
TraesCS2B01G342600.2	Wheat	plastid	40.72	28.09
VIT_00s1463g00010.t01	Wine grape	plastid	12.05	28.03
TraesCS4B01G087500.1	Wheat	mitochondrion	24.76	18.01

Protein Annotations

MapMan:19.4.2.3	Gene3D:2.40.10.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0004252	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006091	GO:GO:0006508	GO:GO:0008150
GO:GO:0008152	GO:GO:0009507	GO:GO:0009536	GO:GO:0009543	GO:GO:0009579	GO:GO:0009987
GO:GO:0010206	GO:GO:0015979	GO:GO:0016787	GO:GO:0019538	GO:GO:0031977	PFAM:PF13365
PRINTS:PR00834	PANTHER:PTHR43019	PANTHER:PTHR43019:SF3	InterPro:Peptidase_S1C	InterPro:Peptidase_S1_PA	SUPFAM:SSF50494
EnsemblPlantsGene:TraesCS5B01G030700	EnsemblPlants:TraesCS5B01G030700.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr5B:-:34005965..34009717

Molecular Weight (calculated)

32280.4 Da

IEP (calculated)

6.724

GRAVY (calculated)

-0.130

Length

307 amino acids

Sequence
(BLAST)

001: MALQPLLRLL LRPPPPPPPP THRTPHLPAP SPTRRATAAA LLLLAVAAPP PRPARAEDDV DEPHVVRLFE EATPSVVFIK DLLVAPPPRT RGRDGGGAQP
101: VEDEEGGATV EGTGSGFVWD SLGHIVTNYH VVAKLAGDGS ESHRCKVFLE DSSGTSYSKE GRLIGYDPTY DLAVLKVDVD GDKLRPALLG TSQGLRVGQS
201: CFAIGNPLGY EHTLTTGVVS GLGREIPSPN GRVIRGAIQT DAAINAGNSG GPLIDSYGHV IGVNTATFTR KGSGISSGVN FAIPIDTIVR SVPNLIVYGT
301: DVSNRFY

Best Arabidopsis Sequence Match ( AT4G18370.1 )
(BLAST)

001: MTMALASSKA FSSIFNTLSP INQSKFVLAC SGSNHVDVID RRRRIMIFGS SLALTSSLLG SNQQRLPMES AIALEQFKEK EEELEEEEER NVNLFQKTSP
101: SVVYIEAIEL PKTSSGDILT DEENGKIEGT GSGFVWDKLG HIVTNYHVIA KLATDQFGLQ RCKVSLVDAK GTRFSKEGKI VGLDPDNDLA VLKIETEGRE
201: LNPVVLGTSN DLRVGQSCFA IGNPYGYENT LTIGVVSGLG REIPSPNGKS ISEAIQTDAD INSGNSGGPL LDSYGHTIGV NTATFTRKGS GMSSGVNFAI
301: PIDTVVRTVP YLIVYGTAYR DRF

Arabidopsis Description

DEGP5Protease Do-like 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SEL7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.