Factsheet for Bra011636.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX75524	Canola	plastid	97.8	97.8
AT4G35770.1	Thale cress	plastid	70.88	70.88
Bra037191.1-P	Field mustard	cytosol	37.36	54.84
Os06t0725000-01	Rice	cytosol	41.21	52.08
TraesCS7A01G545200.1	Wheat	cytosol	39.01	50.35
VIT_00s0684g00030.t01	Wine grape	plastid	48.35	48.62
GSMUA_Achr8P34150_001	Banana	plastid	48.35	48.09
GSMUA_Achr11P...	Banana	mitochondrion	41.21	47.17
KRH76577	Soybean	nucleus	45.6	44.62
PGSC0003DMT400009432	Potato	plastid	44.51	43.55
TraesCS7B01G414600.1	Wheat	plastid	43.96	43.24
TraesCS7D01G531400.1	Wheat	plastid	43.41	42.7
TraesCS7A01G545100.1	Wheat	plastid	43.41	42.7
Solyc02g083280.2.1	Tomato	plastid	43.41	42.47
TraesCS7D01G531600.1	Wheat	plastid	45.05	42.27
Zm00001d014816_P001	Maize	plastid	43.96	41.88
TraesCS7B01G019600.1	Wheat	plastid	45.05	41.62
EER90413	Sorghum	mitochondrion	42.31	41.62
GSMUA_Achr11P...	Banana	cytosol	30.22	41.35
Bra012056.1-P	Field mustard	cytosol	29.12	40.77
TraesCS7B01G467800.2	Wheat	plastid	41.21	40.32
TraesCS7D01G531800.1	Wheat	plastid	41.21	39.27
TraesCSU01G099000.1	Wheat	plastid	35.71	38.92
EER90414	Sorghum	plastid	43.96	38.65
Bra031805.1-P	Field mustard	cytosol	28.02	38.64
KRH28873	Soybean	endoplasmic reticulum	45.6	37.22
HORVU0Hr1G022690.3	Barley	cytosol	42.31	33.05
Bra002059.1-P	Field mustard	cytosol	25.27	32.62
HORVU0Hr1G022680.1	Barley	plastid	41.76	32.07
TraesCSU01G225200.1	Wheat	plastid	29.12	31.18
TraesCS7B01G468400.1	Wheat	mitochondrion	37.36	26.15
TraesCS7B01G468600.1	Wheat	mitochondrion	37.36	26.15

Protein Annotations

Gene3D:3.40.250.10	MapMan:35.1	EnsemblPlantsGene:Bra011636	EnsemblPlants:Bra011636.1	EnsemblPlants:Bra011636.1-P	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006950	GO:GO:0006979	GO:GO:0007568
GO:GO:0008150	GO:GO:0009507	GO:GO:0009536	GO:GO:0009611	GO:GO:0009719	GO:GO:0009753
InterPro:IPR001763	InterPro:IPR036873	UniProt:M4D579	PFAM:PF00581	PFscan:PS50206	PANTHER:PTHR45431
InterPro:Rhodanese-like_dom	InterPro:Rhodanese-like_dom_sf	SMART:SM00450	SUPFAM:SSF52821	UniParc:UPI0002546F5E	:

Description

AT4G35770 (E=2e-080) SEN1, ATSEN1, DIN1 | SEN1 (SENESCENCE 1)

Coordinates

chrA01:-:1329057..1329920

Molecular Weight (calculated)

19960.7 Da

IEP (calculated)

9.482

GRAVY (calculated)

-0.229

Length

182 amino acids

Sequence
(BLAST)

001: MESALNTATR IGSWSSAISP PLEVCRSFKW KLPTATRRVV AVADRQNSSF RWRKVTTGRA NVAAEAARVP TSVPVRVARE LAQAGYKYLD VRTPDEFSIG
101: HPPSAINVPY MYRVGSGMVK NPSFLRQVSS HFKKHDDIII GCESGERSLM ASTELLTAGF TGVTDIAGGY VAWTENELPV EE

Best Arabidopsis Sequence Match ( AT4G35770.1 )
(BLAST)

001: METTAFNTTS RIGNWSSAIS PPLQTCGSFK CQLPTRRGVI VADLRNSNFR WRKATTTSRG NVAAEAVKIP TSVPVRVARE LAQAGYRYLD VRTPDEFSIG
101: HPTRAINVPY MYRVGSGMVK NPSFLRQVSS HFRKHDEIII GCESGQMSFM ASTDLLTAGF TAITDIAGGY VAWTENELPV EE

Arabidopsis Description

STR15SEN1 [Source:UniProtKB/TrEMBL;Acc:A0A178UYD5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.