CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra011636.1-P	Field mustard	plastid	97.8	97.8
CDX69162	Canola	plastid	69.23	83.44
AT4G35770.1	Thale cress	plastid	70.88	70.88
CDX81421	Canola	cytosol	40.66	59.68
CDY18582	Canola	cytosol	40.66	59.68
Os06t0725000-01	Rice	cytosol	41.21	52.08
TraesCS7A01G545200.1	Wheat	cytosol	38.46	49.65
VIT_00s0684g00030.t01	Wine grape	plastid	48.35	48.62
GSMUA_Achr8P34150_001	Banana	plastid	47.8	47.54
GSMUA_Achr11P...	Banana	mitochondrion	40.11	45.91
KRH76577	Soybean	nucleus	46.15	45.16
TraesCS7B01G414600.1	Wheat	plastid	44.51	43.78
TraesCS7D01G531400.1	Wheat	plastid	43.96	43.24
TraesCS7A01G545100.1	Wheat	plastid	43.96	43.24
PGSC0003DMT400009432	Potato	plastid	43.96	43.01
TraesCS7D01G531600.1	Wheat	plastid	45.6	42.78
Solyc02g083280.2.1	Tomato	plastid	42.86	41.94
Zm00001d014816_P001	Maize	plastid	43.96	41.88
TraesCS7B01G019600.1	Wheat	plastid	44.51	41.12
EER90413	Sorghum	mitochondrion	41.76	41.08
TraesCS7B01G467800.2	Wheat	plastid	41.76	40.86
GSMUA_Achr11P...	Banana	cytosol	29.67	40.6
TraesCSU01G099000.1	Wheat	plastid	36.81	40.12
CDY55100	Canola	cytosol	25.82	39.83
CDY45212	Canola	cytosol	27.47	39.68
CDY30783	Canola	cytosol	27.47	39.68
TraesCS7D01G531800.1	Wheat	plastid	41.21	39.27
CDY45211	Canola	cytosol	28.02	39.23
EER90414	Sorghum	plastid	43.96	38.65
CDY57763	Canola	cytosol	28.02	38.64
KRH28873	Soybean	endoplasmic reticulum	46.15	37.67
HORVU0Hr1G022680.1	Barley	plastid	43.41	33.33
HORVU0Hr1G022690.3	Barley	cytosol	42.31	33.05
TraesCSU01G225200.1	Wheat	plastid	30.22	32.35
CDY49429	Canola	cytosol	24.73	31.91
CDY24335	Canola	cytosol	24.18	31.21
CDY29204	Canola	endoplasmic reticulum, extracellular, vacuole	25.27	30.07
CDY07813	Canola	endoplasmic reticulum	25.27	30.07
TraesCS7B01G468600.1	Wheat	mitochondrion	37.91	26.54
TraesCS7B01G468400.1	Wheat	mitochondrion	37.91	26.54

Protein Annotations

EnsemblPlants:CDX75524	EnsemblPlantsGene:GSBRNA2T00121422001	Gene3D:3.40.250.10	InterPro:IPR001763	InterPro:IPR036873	InterPro:Rhodanese-like_dom
InterPro:Rhodanese-like_dom_sf	PANTHER:PTHR45431	PFAM:PF00581	PFscan:PS50206	ProteinID:CDX75524	ProteinID:CDX75524.1
SMART:SM00450	SUPFAM:SSF52821	UniParc:UPI0004EE4904	MapMan:35.1	:	:

Description

BnaA01g01780D

Coordinates

chrLK031804:+:1484719..1485804

Molecular Weight (calculated)

20043.8 Da

IEP (calculated)

9.777

GRAVY (calculated)

-0.238

Length

182 amino acids

Sequence
(BLAST)

001: MESALNTATR IGSWSSAISP PLEVCRSFKW KLPTATRRVV AVADRQNSSF RWRKVTTGRA NVAAEAARVP TSVPVRVARE LAQAGYKYLD VRTPDEFSIG
101: HPPSAINVPY MYRVGSGMVK NRSFLRQVSS HFRKHDEIII GCESGERSLL ASTELLTAGF TGVTDIAGGY VAWTENELPV EE

Best Arabidopsis Sequence Match ( AT4G35770.1 )
(BLAST)

001: METTAFNTTS RIGNWSSAIS PPLQTCGSFK CQLPTRRGVI VADLRNSNFR WRKATTTSRG NVAAEAVKIP TSVPVRVARE LAQAGYRYLD VRTPDEFSIG
101: HPTRAINVPY MYRVGSGMVK NPSFLRQVSS HFRKHDEIII GCESGQMSFM ASTDLLTAGF TAITDIAGGY VAWTENELPV EE

Arabidopsis Description

STR15SEN1 [Source:UniProtKB/TrEMBL;Acc:A0A178UYD5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.