Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY45212 | Canola | cytosol | 100.0 | 100.0 |
| CDY45211 | Canola | cytosol | 95.24 | 92.31 |
| CDY57763 | Canola | cytosol | 84.13 | 80.3 |
| CDY55100 | Canola | cytosol | 73.02 | 77.97 |
| AT5G66170.2 | Thale cress | cytosol | 77.78 | 71.01 |
| Solyc02g083730.2.1 | Tomato | cytosol | 53.17 | 51.94 |
| PGSC0003DMT400009210 | Potato | endoplasmic reticulum | 55.56 | 50.0 |
| VIT_04s0023g03600.t01 | Wine grape | cytosol | 52.38 | 49.62 |
| GSMUA_Achr5P18880_001 | Banana | endoplasmic reticulum | 53.17 | 47.86 |
| CDY18582 | Canola | cytosol | 45.24 | 45.97 |
| CDX81421 | Canola | cytosol | 45.24 | 45.97 |
| KRH08053 | Soybean | cytosol | 54.76 | 43.95 |
| KRH69767 | Soybean | cytosol | 54.76 | 43.67 |
| KRH28807 | Soybean | endoplasmic reticulum | 50.0 | 42.28 |
| GSMUA_Achr8P19470_001 | Banana | mitochondrion | 28.57 | 41.86 |
| KRH76647 | Soybean | endoplasmic reticulum | 49.21 | 41.61 |
| CDY29204 | Canola | endoplasmic reticulum, extracellular, vacuole | 50.0 | 41.18 |
| CDY07813 | Canola | endoplasmic reticulum | 50.0 | 41.18 |
| CDY49429 | Canola | cytosol | 43.65 | 39.01 |
| CDY24335 | Canola | cytosol | 42.86 | 38.3 |
| VIT_04s0023g03590.t01 | Wine grape | cytosol | 46.83 | 37.11 |
| CDX69162 | Canola | plastid | 39.68 | 33.11 |
| CDX75524 | Canola | plastid | 39.68 | 27.47 |
Protein Annotations
| EnsemblPlants:CDY30783 | EnsemblPlantsGene:GSBRNA2T00046213001 | Gene3D:3.40.250.10 | InterPro:IPR001763 | InterPro:IPR036873 | InterPro:Rhodanese-like_dom |
| InterPro:Rhodanese-like_dom_sf | PANTHER:PTHR44542 | PANTHER:PTHR44542:SF2 | PFAM:PF00581 | PFscan:PS50206 | ProteinID:CDY30783 |
| ProteinID:CDY30783.1 | ProteinID:CDY45212.1 | SMART:SM00450 | SUPFAM:SSF52821 | UniParc:UPI0004EEB522 | UniProt:A0A078H1U3 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaC07g16830DBnaA07g12780D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H1U3]
Coordinates
chrLK032260:-:368902..369832
Molecular Weight (calculated)
13995.6 Da
IEP (calculated)
7.410
GRAVY (calculated)
-0.349
Length
126 amino acids
Sequence
(BLAST)
(BLAST)
001: MIPEVVTVDV SQAKTLLQSD HQYLDVRTEE EFRRGHCVAP KILNVPYMLN TPQGRVKNPN FLDQVSSLLS PTDYILVGCQ SGARSLNATS ELVAAGYKKV
101: RNIGGGYLAW VDQSFPINKE QQQSTN
101: RNIGGGYLAW VDQSFPINKE QQQSTN
001: MSQSISSSTK AEEVVSVDVS QAKTLLQSGH QYLDVRTQDE FRRGHCEAAK IVNIPYMLNT PQGRVKNQEF LEQVSSLLNP ADDILVGCQS GARSLKATTE
101: LVAAGYKKVR NVGGGYLAWV DHSFPINTEE EEPSAN
101: LVAAGYKKVR NVGGGYLAWV DHSFPINTEE EEPSAN
Arabidopsis Description
STR18Sulfurtransferase 18 [Source:UniProtKB/TrEMBL;Acc:F4JZ39]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.