CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18582	Canola	cytosol	98.39	98.39
Bra037191.1-P	Field mustard	cytosol	86.29	86.29
AT5G66040.1	Thale cress	cytosol	73.39	75.83
CDX69162	Canola	plastid	60.48	49.67
Os06t0725000-01	Rice	cytosol	56.45	48.61
TraesCS7A01G545200.1	Wheat	cytosol	53.23	46.81
GSMUA_Achr11P...	Banana	mitochondrion	59.68	46.54
CDY30783	Canola	cytosol	45.97	45.24
CDY45212	Canola	cytosol	45.97	45.24
CDY45211	Canola	cytosol	45.97	43.85
VIT_00s0684g00030.t01	Wine grape	plastid	63.71	43.65
CDY57763	Canola	cytosol	45.16	42.42
GSMUA_Achr11P...	Banana	cytosol	45.16	42.11
GSMUA_Achr8P34150_001	Banana	plastid	61.29	41.53
CDY55100	Canola	cytosol	39.52	41.53
CDX75524	Canola	plastid	59.68	40.66
PGSC0003DMT400009432	Potato	plastid	60.48	40.32
Solyc02g083280.2.1	Tomato	plastid	58.87	39.25
Zm00001d014816_P001	Maize	plastid	59.68	38.74
KRH76577	Soybean	nucleus	58.06	38.71
CDY24335	Canola	cytosol	42.74	37.59
CDY49429	Canola	cytosol	42.74	37.59
TraesCS7A01G545100.1	Wheat	plastid	54.84	36.76
TraesCS7D01G531400.1	Wheat	plastid	54.84	36.76
TraesCS7D01G531600.1	Wheat	plastid	57.26	36.6
TraesCS7B01G414600.1	Wheat	plastid	54.03	36.22
TraesCS7B01G467800.2	Wheat	plastid	54.03	36.02
TraesCS7B01G019600.1	Wheat	plastid	56.45	35.53
TraesCS7D01G531800.1	Wheat	plastid	54.03	35.08
EER90414	Sorghum	plastid	58.06	34.78
EER90413	Sorghum	mitochondrion	51.61	34.59
KRH28873	Soybean	endoplasmic reticulum	58.06	32.29
CDY07813	Canola	endoplasmic reticulum	39.52	32.03
CDY29204	Canola	endoplasmic reticulum, extracellular, vacuole	39.52	32.03
TraesCSU01G099000.1	Wheat	plastid	41.94	31.14
HORVU0Hr1G022690.3	Barley	cytosol	54.03	28.76
HORVU0Hr1G022680.1	Barley	plastid	53.23	27.85
TraesCSU01G225200.1	Wheat	plastid	33.87	24.71
TraesCS7B01G468600.1	Wheat	mitochondrion	44.35	21.15
TraesCS7B01G468400.1	Wheat	mitochondrion	44.35	21.15

Protein Annotations

EnsemblPlants:CDX81421	EnsemblPlantsGene:GSBRNA2T00135003001	Gene3D:3.40.250.10	InterPro:IPR001763	InterPro:IPR036873	InterPro:Rhodanese-like_dom
InterPro:Rhodanese-like_dom_sf	PANTHER:PTHR45431	PFAM:PF00581	PFscan:PS50206	ProteinID:CDX81421	ProteinID:CDX81421.1
SMART:SM00450	SUPFAM:SSF52821	UniParc:UPI0001CAA452	MapMan:35.1	:	:

Description

BnaC09g08320D

Coordinates

chrLK031824:-:1642432..1643369

Molecular Weight (calculated)

13370.6 Da

IEP (calculated)

5.536

GRAVY (calculated)

-0.331

Length

124 amino acids

Sequence
(BLAST)

001: MAEGGNRVPS SVSVIDAHEL LQAGHRYLDV RTPEEFSQGH ATGAINVPYM NRGNFIAFWM SKNPNFLEQV SSHFGKADEV LVGCQSGGRS LRATAELLDA
101: GFTGVKDISG GYSAWAQNNL PTQD

Best Arabidopsis Sequence Match ( AT5G66040.1 )
(BLAST)

001: MAEESRVPSS VSVTVAHDLL LAGHRYLDVR TPEEFSQGHA CGAINVPYMN RGASGMSKNP DFLEQVSSHF GQSDNIIVGC QSGGRSIKAT TDLLHAGFTG
101: VKDIVGGYSA WAKNGLPTKA

Arabidopsis Description

STR16Thiosulfate sulfurtransferase 16, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q39129]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.