Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra031805.1-P | Field mustard | cytosol | 97.73 | 97.73 |
| CDY55100 | Canola | cytosol | 78.79 | 88.14 |
| CDY45211 | Canola | cytosol | 83.33 | 84.62 |
| CDY45212 | Canola | cytosol | 80.3 | 84.13 |
| CDY30783 | Canola | cytosol | 80.3 | 84.13 |
| AT5G66170.2 | Thale cress | cytosol | 75.0 | 71.74 |
| Solyc02g083730.2.1 | Tomato | cytosol | 49.24 | 50.39 |
| PGSC0003DMT400009210 | Potato | endoplasmic reticulum | 53.03 | 50.0 |
| GSMUA_Achr5P18880_001 | Banana | endoplasmic reticulum | 51.52 | 48.57 |
| VIT_04s0023g03600.t01 | Wine grape | cytosol | 48.48 | 48.12 |
| CDX81421 | Canola | cytosol | 42.42 | 45.16 |
| CDY18582 | Canola | cytosol | 41.67 | 44.35 |
| KRH76647 | Soybean | endoplasmic reticulum | 50.0 | 44.3 |
| GSMUA_Achr8P19470_001 | Banana | mitochondrion | 28.79 | 44.19 |
| KRH28807 | Soybean | endoplasmic reticulum | 49.24 | 43.62 |
| KRH08053 | Soybean | cytosol | 50.76 | 42.68 |
| KRH69767 | Soybean | cytosol | 50.76 | 42.41 |
| CDY29204 | Canola | endoplasmic reticulum, extracellular, vacuole | 46.97 | 40.52 |
| CDY07813 | Canola | endoplasmic reticulum | 46.97 | 40.52 |
| CDY49429 | Canola | cytosol | 40.91 | 38.3 |
| CDY24335 | Canola | cytosol | 40.15 | 37.59 |
| VIT_04s0023g03590.t01 | Wine grape | cytosol | 43.18 | 35.85 |
| CDX69162 | Canola | plastid | 37.88 | 33.11 |
| CDX75524 | Canola | plastid | 38.64 | 28.02 |
Protein Annotations
| EnsemblPlants:CDY57763 | EnsemblPlantsGene:GSBRNA2T00022607001 | Gene3D:3.40.250.10 | InterPro:IPR001763 | InterPro:IPR036873 | InterPro:Rhodanese-like_dom |
| InterPro:Rhodanese-like_dom_sf | PANTHER:PTHR44542 | PANTHER:PTHR44542:SF2 | PFAM:PF00581 | PFscan:PS50206 | ProteinID:CDY57763 |
| ProteinID:CDY57763.1 | SMART:SM00450 | SUPFAM:SSF52821 | UniParc:UPI0004EC4FDC | UniProt:A0A078J2P4 | MapMan:35.1 |
Description
BnaC02g45050DBnaC02g45050D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J2P4]
Coordinates
chrLK033602:-:19761..22245
Molecular Weight (calculated)
14836.6 Da
IEP (calculated)
6.247
GRAVY (calculated)
-0.407
Length
132 amino acids
Sequence
(BLAST)
(BLAST)
001: MFPDSSKREE VVTVDVSQAK ILLQSDHQYL DVRTEEEFRR GHCFVPKILN VPYMLNSPQG RVKNQDFLDQ VSSLLNPTDD ILVGCQSGAR SLNATTELIS
101: AGFKKVRNVG GGYLAWVDHN FPIIKEQQQS AN
101: AGFKKVRNVG GGYLAWVDHN FPIIKEQQQS AN
001: MSQSISSSTK AEEVVSVDVS QAKTLLQSGH QYLDVRTQDE FRRGHCEAAK IVNIPYMLNT PQGRVKNQEF LEQVSSLLNP ADDILVGCQS GARSLKATTE
101: LVAAGYKKVR NVGGGYLAWV DHSFPINTEE EEPSAN
101: LVAAGYKKVR NVGGGYLAWV DHSFPINTEE EEPSAN
Arabidopsis Description
STR18Sulfurtransferase 18 [Source:UniProtKB/TrEMBL;Acc:F4JZ39]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.