Subcellular Localization
min:
: max
Winner_takes_all: extracellular, endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- golgi 5
- plasma membrane 5
- endoplasmic reticulum 6
- vacuole 6
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY07813 | Canola | endoplasmic reticulum | 98.04 | 98.04 |
| AT2G17850.3 | Thale cress | endoplasmic reticulum | 72.55 | 59.04 |
| CDY30783 | Canola | cytosol | 41.18 | 50.0 |
| CDY45212 | Canola | cytosol | 41.18 | 50.0 |
| GSMUA_Achr5P18880_001 | Banana | endoplasmic reticulum | 44.44 | 48.57 |
| CDY45211 | Canola | cytosol | 40.52 | 47.69 |
| CDY57763 | Canola | cytosol | 40.52 | 46.97 |
| VIT_04s0023g03600.t01 | Wine grape | cytosol | 39.22 | 45.11 |
| Solyc02g083730.2.1 | Tomato | cytosol | 37.25 | 44.19 |
| CDY55100 | Canola | cytosol | 33.99 | 44.07 |
| KRH28807 | Soybean | endoplasmic reticulum | 42.48 | 43.62 |
| PGSC0003DMT400009210 | Potato | endoplasmic reticulum | 39.87 | 43.57 |
| KRH76647 | Soybean | endoplasmic reticulum | 41.83 | 42.95 |
| KRH08053 | Soybean | cytosol | 41.83 | 40.76 |
| CDY18582 | Canola | cytosol | 32.03 | 39.52 |
| CDX81421 | Canola | cytosol | 32.03 | 39.52 |
| KRH69767 | Soybean | cytosol | 39.87 | 38.61 |
| VIT_04s0023g03590.t01 | Wine grape | cytosol | 39.22 | 37.74 |
| GSMUA_Achr8P19470_001 | Banana | mitochondrion | 20.91 | 37.21 |
| CDY49429 | Canola | cytosol | 32.03 | 34.75 |
| CDY24335 | Canola | cytosol | 31.37 | 34.04 |
| CDX69162 | Canola | plastid | 30.07 | 30.46 |
| CDX75524 | Canola | plastid | 30.07 | 25.27 |
Protein Annotations
| EnsemblPlants:CDY29204 | EnsemblPlantsGene:GSBRNA2T00042109001 | Gene3D:3.40.250.10 | InterPro:IPR001763 | InterPro:IPR036873 | InterPro:Rhodanese-like_dom |
| InterPro:Rhodanese-like_dom_sf | PANTHER:PTHR44542 | PANTHER:PTHR44542:SF3 | PFAM:PF00581 | PFscan:PS50206 | ProteinID:CDY29204 |
| ProteinID:CDY29204.1 | SignalP:SignalP-noTM | SMART:SM00450 | SUPFAM:SSF52821 | UniParc:UPI0004EDF6D3 | UniProt:A0A078GVM3 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaA06g25530DBnaA06g25530D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GVM3]
Coordinates
chrLK032233:-:196637..197553
Molecular Weight (calculated)
17684.2 Da
IEP (calculated)
7.142
GRAVY (calculated)
-0.175
Length
153 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSSYFIRSV LFIFIVYLQL PCTTLSNSEP EDITIDVNQA HKLLHQGHTF LDVRTVEEFE KGHVNSEKVF NVPYWFYTPQ GQENNPNFLK HVSSLFNQTD
101: HLVVGCKSGV RSLYATRVLV SSGFKSVRNM DGGYIAWMEK RFPVKVELKY DEL
101: HLVVGCKSGV RSLYATRVLV SSGFKSVRNM DGGYIAWMEK RFPVKVELKY DEL
001: MDSLHVLRSF LLLFIVFNHL PRTTTSMSEP KVITIDVNQA QKLLDSGYTF LDVRTVEEFK KGHVDSENVF NVPYWLYTPQ GQEINPNFLK HVSSLCNQTD
101: HLILGCKSGV RSLHATKFLV SSGFKTVRNM DGGYIAWVNK RFPVKVEHKE LKYDEL
101: HLILGCKSGV RSLHATKFLV SSGFKTVRNM DGGYIAWVNK RFPVKVEHKE LKYDEL
Arabidopsis Description
Rhodanese/Cell cycle control phosphatase superfamily protein [Source:TAIR;Acc:AT2G17850]
SUBAcon: [extracellular,endoplasmic reticulum]
SUBAcon: [extracellular,endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.