Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 7
- vacuole 5
- plasma membrane 5
- golgi 5
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY07813 | Canola | endoplasmic reticulum | 59.57 | 73.2 |
| CDY29204 | Canola | endoplasmic reticulum, extracellular, vacuole | 59.04 | 72.55 |
| VIT_04s0023g03600.t01 | Wine grape | cytosol | 35.11 | 49.62 |
| GSMUA_Achr5P18880_001 | Banana | endoplasmic reticulum | 36.7 | 49.29 |
| KRH76647 | Soybean | endoplasmic reticulum | 38.3 | 48.32 |
| Solyc02g083730.2.1 | Tomato | cytosol | 32.45 | 47.29 |
| KRH28807 | Soybean | endoplasmic reticulum | 36.17 | 45.64 |
| PGSC0003DMT400009210 | Potato | endoplasmic reticulum | 32.98 | 44.29 |
| AT5G66170.2 | Thale cress | cytosol | 31.38 | 42.75 |
| KRH08053 | Soybean | cytosol | 34.04 | 40.76 |
| VIT_04s0023g03590.t01 | Wine grape | cytosol | 32.98 | 38.99 |
| KRH69767 | Soybean | cytosol | 32.45 | 38.61 |
| AT5G66040.1 | Thale cress | cytosol | 24.47 | 38.33 |
| GSMUA_Achr8P19470_001 | Banana | mitochondrion | 17.02 | 37.21 |
| AT2G21045.1 | Thale cress | mitochondrion | 28.72 | 31.95 |
| AT4G35770.1 | Thale cress | plastid | 22.34 | 23.08 |
Protein Annotations
| ArrayExpress:AT2G17850 | EnsemblPlants:AT2G17850.3 | EnsemblPlantsGene:AT2G17850 | EntrezGene:816295 | InterPro:IPR001763 | InterPro:IPR036873 |
| InterPro:Rhodanese-like_dom | InterPro:Rhodanese-like_dom_sf | PANTHER:PTHR44542 | PANTHER:PTHR44542:SF3 | PFAM:PF00581 | PFscan:PS50206 |
| ProteinID:ANM62755.1 | RefSeq:AT2G17850 | RefSeq:AT2G17850-TAIR-G | RefSeq:NP_001324888.1 | SignalP:SignalP-noTM | SMART:SM00450 |
| SUPFAM:SSF52821 | TAIR:AT2G17850 | UniParc:UPI0008488D8C | UniProt:A0A1P8B1H1 | MapMan:35.1 | : |
Description
Rhodanese/Cell cycle control phosphatase superfamily protein [Source:TAIR;Acc:AT2G17850]
Coordinates
chr2:-:7760005..7760839
Molecular Weight (calculated)
21816.6 Da
IEP (calculated)
9.735
GRAVY (calculated)
-0.049
Length
188 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSLHVLRSF LLLFIVFNHL PRTTTSMSEP KVITIDVNQA QKLLDSGYTF LDVRLILKPF RFSHAFIVVR YYCLVISEIL RAVKHRTVEE FKKGHVDSEN
101: VFNVPYWLYT PQGQEINPNF LKHVSSLCNQ TDHLILGCKS GVRSLHATKF LVSSGFKTVR NMDGGYIAWV NKRFPVKVEH KELKYDEL
101: VFNVPYWLYT PQGQEINPNF LKHVSSLCNQ TDHLILGCKS GVRSLHATKF LVSSGFKTVR NMDGGYIAWV NKRFPVKVEH KELKYDEL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.