Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra011636.1-P | Field mustard | plastid | 70.88 | 70.88 |
| CDX75524 | Canola | plastid | 70.88 | 70.88 |
| CDX69162 | Canola | plastid | 57.69 | 69.54 |
| AT5G66040.1 | Thale cress | cytosol | 40.11 | 60.83 |
| TraesCS7A01G545200.1 | Wheat | cytosol | 39.01 | 50.35 |
| Os06t0725000-01 | Rice | cytosol | 39.56 | 50.0 |
| VIT_00s0684g00030.t01 | Wine grape | plastid | 45.6 | 45.86 |
| GSMUA_Achr8P34150_001 | Banana | plastid | 44.51 | 44.26 |
| KRH76577 | Soybean | nucleus | 45.05 | 44.09 |
| GSMUA_Achr11P... | Banana | mitochondrion | 37.91 | 43.4 |
| TraesCS7A01G545100.1 | Wheat | plastid | 43.41 | 42.7 |
| TraesCS7B01G414600.1 | Wheat | plastid | 43.41 | 42.7 |
| TraesCS7D01G531400.1 | Wheat | plastid | 42.86 | 42.16 |
| PGSC0003DMT400009432 | Potato | plastid | 41.76 | 40.86 |
| TraesCS7D01G531600.1 | Wheat | plastid | 43.41 | 40.72 |
| TraesCSU01G099000.1 | Wheat | plastid | 37.36 | 40.72 |
| TraesCS7B01G019600.1 | Wheat | plastid | 43.96 | 40.61 |
| GSMUA_Achr11P... | Banana | cytosol | 29.67 | 40.6 |
| TraesCS7D01G531800.1 | Wheat | plastid | 41.76 | 39.79 |
| Zm00001d014816_P001 | Maize | plastid | 41.76 | 39.79 |
| Solyc02g083280.2.1 | Tomato | plastid | 40.66 | 39.78 |
| TraesCS7B01G467800.2 | Wheat | plastid | 40.66 | 39.78 |
| EER90413 | Sorghum | mitochondrion | 39.56 | 38.92 |
| EER90414 | Sorghum | plastid | 40.66 | 35.75 |
| KRH28873 | Soybean | endoplasmic reticulum | 42.86 | 34.98 |
| AT5G66170.2 | Thale cress | cytosol | 26.37 | 34.78 |
| TraesCSU01G225200.1 | Wheat | plastid | 31.32 | 33.53 |
| HORVU0Hr1G022690.3 | Barley | cytosol | 41.76 | 32.62 |
| HORVU0Hr1G022680.1 | Barley | plastid | 42.31 | 32.49 |
| TraesCS7B01G468400.1 | Wheat | mitochondrion | 37.36 | 26.15 |
| TraesCS7B01G468600.1 | Wheat | mitochondrion | 37.36 | 26.15 |
| AT2G21045.1 | Thale cress | mitochondrion | 22.53 | 24.26 |
| AT2G17850.3 | Thale cress | endoplasmic reticulum | 23.08 | 22.34 |
Protein Annotations
| Gene3D:3.40.250.10 | MapMan:35.1 | EntrezGene:829730 | UniProt:A0A178UYD5 | ProteinID:AAA80302.1 | ProteinID:AEE86560.1 |
| ProteinID:AEE86561.1 | ArrayExpress:AT4G35770 | EnsemblPlantsGene:AT4G35770 | RefSeq:AT4G35770 | TAIR:AT4G35770 | RefSeq:AT4G35770-TAIR-G |
| EnsemblPlants:AT4G35770.1 | TAIR:AT4G35770.1 | EMBL:AY078973 | EMBL:AY085192 | EMBL:AY091671 | ProteinID:CAA20047.1 |
| ProteinID:CAB81486.1 | GO:GO:0003674 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0006950 | GO:GO:0006979 | GO:GO:0007568 | GO:GO:0008150 | GO:GO:0009507 | GO:GO:0009536 |
| GO:GO:0009579 | GO:GO:0009611 | GO:GO:0009719 | GO:GO:0009753 | InterPro:IPR001763 | InterPro:IPR036873 |
| RefSeq:NP_001078496.1 | RefSeq:NP_195302.1 | ProteinID:OAO98908.1 | PFAM:PF00581 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020003 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS50206 | PANTHER:PTHR45431 |
| UniProt:Q38853 | InterPro:Rhodanese-like_dom | InterPro:Rhodanese-like_dom_sf | Symbol:SEN1 | SMART:SM00450 | SUPFAM:SSF52821 |
| EMBL:U26945 | UniParc:UPI00000AC9E2 | : | : | : | : |
Description
STR15SEN1 [Source:UniProtKB/TrEMBL;Acc:A0A178UYD5]
Coordinates
chr4:+:16944878..16946241
Molecular Weight (calculated)
20079.9 Da
IEP (calculated)
9.206
GRAVY (calculated)
-0.234
Length
182 amino acids
Sequence
(BLAST)
(BLAST)
001: METTAFNTTS RIGNWSSAIS PPLQTCGSFK CQLPTRRGVI VADLRNSNFR WRKATTTSRG NVAAEAVKIP TSVPVRVARE LAQAGYRYLD VRTPDEFSIG
101: HPTRAINVPY MYRVGSGMVK NPSFLRQVSS HFRKHDEIII GCESGQMSFM ASTDLLTAGF TAITDIAGGY VAWTENELPV EE
101: HPTRAINVPY MYRVGSGMVK NPSFLRQVSS HFRKHDEIII GCESGQMSFM ASTDLLTAGF TAITDIAGGY VAWTENELPV EE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.