Factsheet for HORVU0Hr1G022690.3

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G531800.1	Wheat	plastid	56.65	69.11
TraesCSU01G225200.1	Wheat	plastid	49.36	67.65
Os06t0725000-01	Rice	cytosol	40.34	65.28
Zm00001d014816_P001	Maize	plastid	45.49	55.5
AT5G66040.1	Thale cress	cytosol	28.33	55.0
CDY18582	Canola	cytosol	29.18	54.84
CDX81421	Canola	cytosol	28.76	54.03
TraesCS7B01G468400.1	Wheat	mitochondrion	59.66	53.46
TraesCS7B01G468600.1	Wheat	mitochondrion	59.66	53.46
Bra037191.1-P	Field mustard	cytosol	27.47	51.61
CDX69162	Canola	plastid	32.62	50.33
HORVU0Hr1G022680.1	Barley	plastid	50.64	49.79
EER90413	Sorghum	mitochondrion	39.48	49.73
GSMUA_Achr11P...	Banana	mitochondrion	33.05	48.43
EER90414	Sorghum	plastid	42.06	47.34
PGSC0003DMT400009432	Potato	plastid	36.91	46.24
Solyc02g083280.2.1	Tomato	plastid	36.05	45.16
GSMUA_Achr11P...	Banana	cytosol	25.75	45.11
CDX75524	Canola	plastid	33.05	42.31
Bra011636.1-P	Field mustard	plastid	33.05	42.31
VIT_00s0684g00030.t01	Wine grape	plastid	32.62	41.99
AT4G35770.1	Thale cress	plastid	32.62	41.76
HORVU3Hr1G034280.1	Barley	cytosol	21.89	40.48
KRH76577	Soybean	nucleus	31.33	39.25
HORVU6Hr1G000130.1	Barley	cytosol	19.74	34.33
KRH28873	Soybean	endoplasmic reticulum	31.76	33.18
HORVU6Hr1G000090.2	Barley	cytosol	18.03	32.56
HORVU6Hr1G000070.1	Barley	cytosol	18.88	32.35
HORVU6Hr1G024770.2	Barley	cytosol	17.6	30.83
HORVU7Hr1G031140.6	Barley	plastid	24.03	28.72

Protein Annotations

EnsemblPlants:HORVU0Hr1G022690.3	EnsemblPlantsGene:HORVU0Hr1G022690	Gene3D:3.40.250.10	InterPro:IPR001763	InterPro:IPR036873	InterPro:Rhodanese-like_dom
InterPro:Rhodanese-like_dom_sf	PANTHER:PTHR45431	PFAM:PF00581	PFscan:PS50206	SEG:seg	SMART:SM00450
SUPFAM:SSF52821	UniParc:UPI000B47EC60	UniProt:A0A287E7X0	MapMan:35.1	:	:

Description

No Description!

Coordinates

chrchrUn:+:114903028..114904849

Molecular Weight (calculated)

24583.4 Da

IEP (calculated)

10.214

GRAVY (calculated)

-0.058

Length

233 amino acids

Sequence
(BLAST)

001: KVTTFLRGIS AQSAPQLYLY LYPELSVGVP KNETGARRTG AMASDCSFAH GVSLPAHRPP LAVTTCRLRH GAARAVARHR AMAAARRVSV GAARRRIGSA
101: RYGSNGAAAL RADEAEVAVP PSVPVRVAHE LQLAGHRYLD VRTEGEFAGG HPAGAVNVPY MYSTGSGMAK NSHFIDQVLA IFGKDDEIII GCQSGKRSLM
201: AAAELCSAGF TAVTDIAGGF STWRENGLPI NVR

Best Arabidopsis Sequence Match ( AT4G35770.1 )
(BLAST)

001: METTAFNTTS RIGNWSSAIS PPLQTCGSFK CQLPTRRGVI VADLRNSNFR WRKATTTSRG NVAAEAVKIP TSVPVRVARE LAQAGYRYLD VRTPDEFSIG
101: HPTRAINVPY MYRVGSGMVK NPSFLRQVSS HFRKHDEIII GCESGQMSFM ASTDLLTAGF TAITDIAGGY VAWTENELPV EE

Arabidopsis Description

STR15SEN1 [Source:UniProtKB/TrEMBL;Acc:A0A178UYD5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.