Factsheet for TraesCS7B01G468600.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G468400.1	Wheat	mitochondrion	100.0	100.0
TraesCSU01G225200.1	Wheat	plastid	56.54	86.47
HORVU0Hr1G022690.3	Barley	cytosol	53.46	59.66
Os06t0725000-01	Rice	cytosol	32.69	59.03
TraesCS7D01G531800.1	Wheat	plastid	42.69	58.12
TraesCS7B01G467800.2	Wheat	plastid	40.77	56.99
TraesCS7B01G414600.1	Wheat	plastid	40.38	56.76
TraesCS7B01G019600.1	Wheat	plastid	42.69	56.35
Zm00001d014816_P001	Maize	plastid	35.38	48.17
AT5G66040.1	Thale cress	cytosol	21.15	45.83
CDY18582	Canola	cytosol	21.54	45.16
CDX69162	Canola	plastid	26.15	45.03
CDX81421	Canola	cytosol	21.15	44.35
Bra037191.1-P	Field mustard	cytosol	20.38	42.74
EER90413	Sorghum	mitochondrion	30.38	42.7
EER90414	Sorghum	plastid	33.85	42.51
GSMUA_Achr11P...	Banana	mitochondrion	25.38	41.51
PGSC0003DMT400009432	Potato	plastid	28.08	39.25
VIT_00s0684g00030.t01	Wine grape	plastid	27.31	39.23
Solyc02g083280.2.1	Tomato	plastid	27.69	38.71
CDX75524	Canola	plastid	26.54	37.91
AT4G35770.1	Thale cress	plastid	26.15	37.36
Bra011636.1-P	Field mustard	plastid	26.15	37.36
KRH76577	Soybean	nucleus	25.38	35.48
GSMUA_Achr11P...	Banana	cytosol	17.69	34.59
TraesCS6B01G011300.1	Wheat	cytosol	16.15	31.34
TraesCS6B01G011500.1	Wheat	cytosol	15.77	30.15
KRH28873	Soybean	endoplasmic reticulum	25.38	29.6
TraesCS6B01G011400.1	Wheat	cytosol	14.62	28.79
TraesCS7B01G055200.2	Wheat	cytosol	21.15	27.78

Protein Annotations

EnsemblPlants:TraesCS7B01G468600.1	EnsemblPlantsGene:TraesCS7B01G468600	Gene3D:3.40.250.10	InterPro:IPR001763	InterPro:IPR036873	InterPro:Rhodanese-like_dom
InterPro:Rhodanese-like_dom_sf	PANTHER:PTHR45431	PFAM:PF00581	PFscan:PS50206	SEG:seg	SMART:SM00450
SUPFAM:SSF52821	TIGR:cd00158	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr7B:+:725640289..725641618

Molecular Weight (calculated)

28148.0 Da

IEP (calculated)

10.012

GRAVY (calculated)

-0.190

Length

260 amino acids

Sequence
(BLAST)

001: MPCVCARLPR FNKKSELNLH HIYILARTER PAGLRSPQER TRARTGQEIM ASEYSFARGV SLPAHRPPLT FTSYRLRHSA ARTMANPRVM AAASAVSVGA
101: ARRMPGSVRY GGAGVAALRA EEVDAVPPSV PVRVAYELQL AGHRYLDVRT EGEFGGGHPV GAVNIPYMYN TGSGMAKNSH FLEQVSAIFR RDDEIIIRCQ
201: SGKRSLMAAA ELCSAGFTAV TTSPEGSRLG GRTDCRSMDG GNAVNIIICL CMLRDTTSVH

Best Arabidopsis Sequence Match ( AT4G35770.1 )
(BLAST)

001: METTAFNTTS RIGNWSSAIS PPLQTCGSFK CQLPTRRGVI VADLRNSNFR WRKATTTSRG NVAAEAVKIP TSVPVRVARE LAQAGYRYLD VRTPDEFSIG
101: HPTRAINVPY MYRVGSGMVK NPSFLRQVSS HFRKHDEIII GCESGQMSFM ASTDLLTAGF TAITDIAGGY VAWTENELPV EE

Arabidopsis Description

STR15SEN1 [Source:UniProtKB/TrEMBL;Acc:A0A178UYD5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.