CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os06t0725000-01	Rice	cytosol	49.28	70.83
TraesCS7A01G545200.1	Wheat	cytosol	47.34	69.5
Zm00001d014816_P001	Maize	plastid	58.94	63.87
CDY18582	Canola	cytosol	34.78	58.06
CDX81421	Canola	cytosol	34.78	58.06
AT5G66040.1	Thale cress	cytosol	32.85	56.67
Bra037191.1-P	Field mustard	cytosol	33.33	55.65
EER90413	Sorghum	mitochondrion	49.28	55.14
TraesCS7B01G414600.1	Wheat	plastid	48.79	54.59
TraesCS7B01G019600.1	Wheat	plastid	51.69	54.31
TraesCS7D01G531600.1	Wheat	plastid	50.72	54.12
TraesCS7A01G545100.1	Wheat	plastid	47.83	53.51
TraesCS7B01G467800.2	Wheat	plastid	47.83	53.23
TraesCS7D01G531800.1	Wheat	plastid	48.79	52.88
GSMUA_Achr11P...	Banana	mitochondrion	40.58	52.83
TraesCS7D01G531400.1	Wheat	plastid	46.86	52.43
CDX69162	Canola	plastid	38.16	52.32
TraesCSU01G099000.1	Wheat	plastid	37.68	46.71
VIT_00s0684g00030.t01	Wine grape	plastid	40.58	46.41
PGSC0003DMT400009432	Potato	plastid	40.58	45.16
CDX75524	Canola	plastid	38.65	43.96
Bra011636.1-P	Field mustard	plastid	38.65	43.96
GSMUA_Achr11P...	Banana	cytosol	28.02	43.61
Solyc02g083280.2.1	Tomato	plastid	39.13	43.55
KRH76577	Soybean	nucleus	39.13	43.55
HORVU0Hr1G022680.1	Barley	plastid	49.28	43.04
HORVU0Hr1G022690.3	Barley	cytosol	47.34	42.06
AT4G35770.1	Thale cress	plastid	35.75	40.66
TraesCSU01G225200.1	Wheat	plastid	33.33	40.59
KRH28873	Soybean	endoplasmic reticulum	37.68	34.98
TraesCS7B01G468400.1	Wheat	mitochondrion	42.51	33.85
TraesCS7B01G468600.1	Wheat	mitochondrion	42.51	33.85
KXG25929	Sorghum	endoplasmic reticulum	28.99	30.77
EES06099	Sorghum	cytosol	22.71	26.11
KXG29509	Sorghum	cytosol	20.77	22.87

Protein Annotations

EnsemblPlants:EER90414	EnsemblPlantsGene:SORBI_3010G270300	EntrezGene:8069213	Gene3D:3.40.250.10	InterPro:IPR001763	InterPro:IPR036873
InterPro:Rhodanese-like_dom	InterPro:Rhodanese-like_dom_sf	PANTHER:PTHR45431	PFAM:PF00581	PFscan:PS50206	ProteinID:EER90414
ProteinID:EER90414.1	RefSeq:XP_002439047.1	SEG:seg	SMART:SM00450	SUPFAM:SSF52821	unigene:Sbi.1599
UniParc:UPI0001A898C3	UniProt:C5Z1Z3	MapMan:35.1	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:60467129..60469704

Molecular Weight (calculated)

21663.8 Da

IEP (calculated)

9.305

GRAVY (calculated)

-0.093

Length

207 amino acids

Sequence
(BLAST)

001: MATSASGVSL LLAQPLPPNG TSLRRVGVAA RAPAPAPARL AATAVRSAHP LAANADAKTR TLRFVSVSVR CVGVGGTEAL RSDAAEPPVP SSVPRSVPVR
101: VAYELQQAGH RYLDVRTEGE FSAGHPEGAV NIPYMNKTGS GMTKNTHFLE QVSRIFGKDD EIIVGCQSGK RSLMAATELC SAGFTAVTDI AGGFSTWREN
201: ELPTTIH

Best Arabidopsis Sequence Match ( AT4G35770.1 )
(BLAST)

001: METTAFNTTS RIGNWSSAIS PPLQTCGSFK CQLPTRRGVI VADLRNSNFR WRKATTTSRG NVAAEAVKIP TSVPVRVARE LAQAGYRYLD VRTPDEFSIG
101: HPTRAINVPY MYRVGSGMVK NPSFLRQVSS HFRKHDEIII GCESGQMSFM ASTDLLTAGF TAITDIAGGY VAWTENELPV EE

Arabidopsis Description

STR15SEN1 [Source:UniProtKB/TrEMBL;Acc:A0A178UYD5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.