CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d053862_P001	Maize	cytosol	54.26	81.6
TraesCS4D01G349800.1	Wheat	cytosol	41.49	61.42
TraesCS6A01G129500.1	Wheat	cytosol	42.02	58.52
TraesCS6D01G118800.1	Wheat	cytosol	40.96	57.89
Os02t0157600-01	Rice	cytosol	39.89	56.39
HORVU6Hr1G024770.2	Barley	cytosol	39.36	55.64
GSMUA_Achr11P...	Banana	cytosol	27.13	48.11
KRH24034	Soybean	cytosol	27.66	35.86
CDY24335	Canola	cytosol	24.47	32.62
Bra002059.1-P	Field mustard	cytosol	24.47	32.62
CDY49429	Canola	cytosol	23.94	31.91
AT2G21045.1	Thale cress	mitochondrion	26.06	28.99
KXG25929	Sorghum	endoplasmic reticulum	26.06	25.13
EER90413	Sorghum	mitochondrion	22.87	23.24
EES06099	Sorghum	cytosol	21.81	22.78
EER90414	Sorghum	plastid	22.87	20.77
PGSC0003DMT400069454	Potato	cytosol	22.87	16.93

Protein Annotations

EnsemblPlants:KXG29509	EnsemblPlantsGene:SORBI_3004G046400	Gene3D:3.40.250.10	InterPro:IPR001763	InterPro:IPR036873	InterPro:Rhodanese-like_dom
InterPro:Rhodanese-like_dom_sf	PANTHER:PTHR44542	PANTHER:PTHR44542:SF4	PFAM:PF00581	PFscan:PS50206	ProteinID:KXG29509
ProteinID:KXG29509.1	SMART:SM00450	SUPFAM:SSF52821	UniParc:UPI0007F1AFB2	UniProt:A0A194YMR4	MapMan:35.1

Description

hypothetical protein

Coordinates

chr4:+:3780148..3781944

Molecular Weight (calculated)

21125.9 Da

IEP (calculated)

8.134

GRAVY (calculated)

-0.531

Length

188 amino acids

Sequence
(BLAST)

001: MTIQHQRSDF REDYFKGELS HRAVSQHILM KGYHFVLPHL HSQNSQLIRG HSCYLVSMAS PVTSSDKEQV IIPTIDADQA HALLSSGHGY VDVRMREDFD
101: KAHAPGARNV PYYLSVTPEG KEKNPHFVEE VAALCGKDDV FIVACNTGNR SRFATADLVN AGFKNVRNLQ GGYRSFLQSA NQQRPQQQ

Best Arabidopsis Sequence Match ( AT2G17850.1 )
(BLAST)

001: MDSLHVLRSF LLLFIVFNHL PRTTTSMSEP KVITIDVNQA QKLLDSGYTF LDVRTVEEFK KGHVDSENVF NVPYWLYTPQ GQEINPNFLK HVSSLCNQTD
101: HLILGCKSGV RSLHATKFLV SSGFKTVRNM DGGYIAWVNK RFPVKVEHKE LKYDEL

Arabidopsis Description

Rhodanese/Cell cycle control phosphatase superfamily protein [Source:TAIR;Acc:AT2G17850]
SUBAcon: [endoplasmic reticulum,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.