CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

plastid 4
endoplasmic reticulum 4
extracellular 2
golgi 2
plasma membrane 2
vacuole 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d025081_P002	Maize	endoplasmic reticulum	56.41	68.32
Os04t0249600-02	Rice	plastid	48.72	62.09
KRH24034	Soybean	cytosol	30.26	40.69
Bra002059.1-P	Field mustard	cytosol	28.72	39.72
CDY24335	Canola	cytosol	28.72	39.72
CDY49429	Canola	cytosol	28.21	39.01
EES06099	Sorghum	cytosol	32.31	35.0
EER90413	Sorghum	mitochondrion	31.28	32.97
AT2G21045.1	Thale cress	mitochondrion	27.69	31.95
EER90414	Sorghum	plastid	30.77	28.99
KXG29509	Sorghum	cytosol	25.13	26.06
PGSC0003DMT400069454	Potato	cytosol	24.62	18.9

Protein Annotations

EnsemblPlants:KXG25929	EnsemblPlantsGene:SORBI_3006G032700	Gene3D:3.40.250.10	InterPro:IPR001763	InterPro:IPR036873	InterPro:Rhodanese-like_dom
InterPro:Rhodanese-like_dom_sf	PANTHER:PTHR44542	PANTHER:PTHR44542:SF3	PFAM:PF00581	PFscan:PS50206	ProteinID:KXG25929
ProteinID:KXG25929.1	SEG:seg	SMART:SM00450	SUPFAM:SSF52821	UniParc:UPI00081AD032	UniProt:A0A1B6PJS5
MapMan:35.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:7357701..7362253

Molecular Weight (calculated)

20999.4 Da

IEP (calculated)

7.939

GRAVY (calculated)

0.022

Length

195 amino acids

Sequence
(BLAST)

001: MMGDGLSSAP CTNSRRRMLP LLPLFAVSLF PGLWSPSSGP ARMTTMRPAI LLTICTLSAL LLVARGLEKP SVAPVVAVGV AAASDLIRSG GHRYLDVRTE
101: EEFRNGHVED SLNVPYLFFT SQGREKNPRF VAQVAADFDK EDNIVVGCKS GVRSELACAD LMAAGFRNVK NIEGGYTAWV ENGLAVKKSQ GQDEL

Best Arabidopsis Sequence Match ( AT5G66040.1 )
(BLAST)

001: MAEESRVPSS VSVTVAHDLL LAGHRYLDVR TPEEFSQGHA CGAINVPYMN RGASGMSKNP DFLEQVSSHF GQSDNIIVGC QSGGRSIKAT TDLLHAGFTG
101: VKDIVGGYSA WAKNGLPTKA

Arabidopsis Description

STR16Thiosulfate sulfurtransferase 16, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q39129]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.