Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 4
- golgi 4
- plasma membrane 4
- endoplasmic reticulum 6
- vacuole 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os04t0249600-02 | Rice | plastid | 56.52 | 59.48 |
| KXG25929 | Sorghum | endoplasmic reticulum | 68.32 | 56.41 |
| KRH24034 | Soybean | cytosol | 36.02 | 40.0 |
| Bra002059.1-P | Field mustard | cytosol | 34.78 | 39.72 |
| CDY24335 | Canola | cytosol | 34.78 | 39.72 |
| CDY49429 | Canola | cytosol | 34.16 | 39.01 |
| Zm00001d054093_P002 | Maize | extracellular | 30.43 | 36.03 |
| Zm00001d053862_P001 | Maize | cytosol | 27.33 | 35.2 |
| AT2G21045.1 | Thale cress | mitochondrion | 32.3 | 30.77 |
| Zm00001d014816_P001 | Maize | plastid | 34.78 | 29.32 |
| PGSC0003DMT400069454 | Potato | cytosol | 27.95 | 17.72 |
Protein Annotations
| Gene3D:3.40.250.10 | MapMan:35.1 | UniProt:A0A1D6J4M3 | ProteinID:AQK42908.1 | InterPro:IPR001763 | InterPro:IPR036873 |
| PFAM:PF00581 | PFscan:PS50206 | PANTHER:PTHR44542 | PANTHER:PTHR44542:SF3 | InterPro:Rhodanese-like_dom | InterPro:Rhodanese-like_dom_sf |
| SMART:SM00450 | SUPFAM:SSF52821 | SignalP:SignalP-noTM | UniParc:UPI00084379A1 | EnsemblPlantsGene:Zm00001d025081 | EnsemblPlants:Zm00001d025081_P002 |
| EnsemblPlants:Zm00001d025081_T002 | SEG:seg | : | : | : | : |
Description
Rhodanese-like domain-containing protein 19 mitochondrial
Coordinates
chr10:-:102855786..102857533
Molecular Weight (calculated)
17122.4 Da
IEP (calculated)
7.347
GRAVY (calculated)
-0.059
Length
161 amino acids
Sequence
(BLAST)
(BLAST)
001: MRSATLLTIC TLSALLLVAR GSEKPSAAPP PVVAVGVAAA SDLIRSGGHR YLDVRTEEEF RSGHVEDSLN VPYLFFTSQG KSIFSSNSGR EKNPKFIAQV
101: AAGFDKEDNI VVGCKSGVRS ELACADLMAA GFRNVKNIEG GYTAWVESGL AVKKSQAQDE L
101: AAGFDKEDNI VVGCKSGVRS ELACADLMAA GFRNVKNIEG GYTAWVESGL AVKKSQAQDE L
001: MAEESRVPSS VSVTVAHDLL LAGHRYLDVR TPEEFSQGHA CGAINVPYMN RGASGMSKNP DFLEQVSSHF GQSDNIIVGC QSGGRSIKAT TDLLHAGFTG
101: VKDIVGGYSA WAKNGLPTKA
101: VKDIVGGYSA WAKNGLPTKA
Arabidopsis Description
STR16Thiosulfate sulfurtransferase 16, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q39129]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.