Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G349800.1 | Wheat | cytosol | 59.2 | 58.27 |
| KXG29509 | Sorghum | cytosol | 81.6 | 54.26 |
| Os02t0157600-01 | Rice | cytosol | 56.0 | 52.63 |
| TraesCS6D01G118800.1 | Wheat | cytosol | 56.0 | 52.63 |
| TraesCS6A01G129500.1 | Wheat | cytosol | 56.8 | 52.59 |
| HORVU6Hr1G024770.2 | Barley | cytosol | 55.2 | 51.88 |
| Zm00001d054093_P002 | Maize | extracellular | 50.4 | 46.32 |
| GSMUA_Achr11P... | Banana | cytosol | 39.2 | 46.23 |
| KRH24034 | Soybean | cytosol | 40.8 | 35.17 |
| Bra002059.1-P | Field mustard | cytosol | 36.0 | 31.91 |
| CDY24335 | Canola | cytosol | 36.0 | 31.91 |
| CDY49429 | Canola | cytosol | 35.2 | 31.21 |
| Zm00001d025081_P002 | Maize | endoplasmic reticulum | 35.2 | 27.33 |
| AT2G21045.1 | Thale cress | mitochondrion | 35.2 | 26.04 |
| Zm00001d014816_P001 | Maize | plastid | 36.0 | 23.56 |
| PGSC0003DMT400069454 | Potato | cytosol | 28.8 | 14.17 |
Protein Annotations
| EMBL:GU134631 | EnsemblPlants:Zm00001d053862_P001 | EnsemblPlants:Zm00001d053862_T001 | EnsemblPlantsGene:Zm00001d053862 | EntrezGene:100502537 | Gene3D:3.40.250.10 |
| InterPro:IPR001763 | InterPro:IPR036873 | InterPro:Rhodanese-like_dom | InterPro:Rhodanese-like_dom_sf | PANTHER:PTHR44542 | PANTHER:PTHR44542:SF4 |
| PFAM:PF00581 | PFscan:PS50206 | ProteinID:AQK60546.1 | ProteinID:AQK60547.1 | SMART:SM00450 | SUPFAM:SSF52821 |
| UniParc:UPI0001BD3499 | UniProt:D1ME28 | MapMan:35.1 | : | : | : |
Description
Rhodanese-like domain-containing protein 19 mitochondrial
Coordinates
chr4:-:242512732..242523643
Molecular Weight (calculated)
13641.9 Da
IEP (calculated)
8.243
GRAVY (calculated)
-0.540
Length
125 amino acids
Sequence
(BLAST)
(BLAST)
001: MASAVTSSDK EQAVPTIDAD EAHALLSSGH GYVDVRMRGD FHKAHAPGAR NVPYYLSVTP QGKEKNPHFV EEVAAFCGKD DVFIVGCNTG NRSRFATADL
101: LNAGFKNVRN LQGGYRSFQQ RAQQQ
101: LNAGFKNVRN LQGGYRSFQQ RAQQQ
001: MSQSISSSTK AEEVVSVDVS QAKTLLQSGH QYLDVRTQDE FRRGHCEAAK IVNIPYMLNT PQGRVKNQEF LEQVSSLLNP ADDILVGCQS GARSLKATTE
101: LVAAGYKKVR NVGGGYLAWV DHSFPINTEE EEPSAN
101: LVAAGYKKVR NVGGGYLAWV DHSFPINTEE EEPSAN
Arabidopsis Description
STR18Sulfurtransferase 18 [Source:UniProtKB/TrEMBL;Acc:F4JZ39]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.