Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G118800.1 | Wheat | cytosol | 72.44 | 69.17 |
| Zm00001d053862_P001 | Maize | cytosol | 58.27 | 59.2 |
| Os02t0157600-01 | Rice | cytosol | 57.48 | 54.89 |
| TraesCS6D01G008500.1 | Wheat | cytosol | 55.12 | 53.03 |
| TraesCS6D01G008300.1 | Wheat | cytosol | 55.12 | 52.24 |
| TraesCS6D01G008400.1 | Wheat | cytosol | 54.33 | 51.49 |
| GSMUA_Achr11P... | Banana | cytosol | 41.73 | 50.0 |
| TraesCS6D01G008600.1 | Wheat | cytosol | 51.18 | 47.79 |
| KXG29509 | Sorghum | cytosol | 61.42 | 41.49 |
| KRH24034 | Soybean | cytosol | 37.01 | 32.41 |
| CDY49429 | Canola | cytosol | 35.43 | 31.91 |
| CDY24335 | Canola | cytosol | 33.86 | 30.5 |
| Bra002059.1-P | Field mustard | cytosol | 33.86 | 30.5 |
| AT2G21045.1 | Thale cress | mitochondrion | 34.65 | 26.04 |
| TraesCS7D01G531600.1 | Wheat | plastid | 36.22 | 23.71 |
| TraesCS7D01G531400.1 | Wheat | plastid | 33.86 | 23.24 |
| TraesCS7D01G531800.1 | Wheat | plastid | 33.86 | 22.51 |
| TraesCS7D01G153100.3 | Wheat | cytosol, plastid | 37.8 | 22.33 |
| PGSC0003DMT400069454 | Potato | cytosol | 28.35 | 14.17 |
Protein Annotations
| EnsemblPlants:TraesCS4D01G349800.1 | EnsemblPlantsGene:TraesCS4D01G349800 | Gene3D:3.40.250.10 | InterPro:IPR001763 | InterPro:IPR036873 | InterPro:Rhodanese-like_dom |
| InterPro:Rhodanese-like_dom_sf | PANTHER:PTHR44542 | PANTHER:PTHR44542:SF4 | PFAM:PF00581 | PFscan:PS50206 | SMART:SM00450 |
| SUPFAM:SSF52821 | TIGR:cd00158 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr4D:-:502546388..502548265
Molecular Weight (calculated)
13743.1 Da
IEP (calculated)
5.652
GRAVY (calculated)
-0.452
Length
127 amino acids
Sequence
(BLAST)
(BLAST)
001: MASANNEQLV STPTVDAGHA RTLLSSDGGH GYLDVRMRED FDKEHAGARN VPYYLSVTPQ GKEKNPRFVE EVSALYGKEE PLIVGCRTGV RSKLATADLI
101: NVGFENAKSL QGGYLAFLQS AAADQQQ
101: NVGFENAKSL QGGYLAFLQS AAADQQQ
001: MDSLHVLRSF LLLFIVFNHL PRTTTSMSEP KVITIDVNQA QKLLDSGYTF LDVRTVEEFK KGHVDSENVF NVPYWLYTPQ GQEINPNFLK HVSSLCNQTD
101: HLILGCKSGV RSLHATKFLV SSVSTKRFKI
101: HLILGCKSGV RSLHATKFLV SSVSTKRFKI
Arabidopsis Description
Rhodanese/Cell cycle control phosphatase superfamily protein [Source:TAIR;Acc:AT2G17850]
SUBAcon: [plasma membrane,extracellular]
SUBAcon: [plasma membrane,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.