Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d054093_P002 | Maize | extracellular | 55.66 | 43.38 |
| TraesCS4D01G349800.1 | Wheat | cytosol | 50.0 | 41.73 |
| Os02t0157600-01 | Rice | cytosol | 50.0 | 39.85 |
| TraesCS6D01G008500.1 | Wheat | cytosol | 49.06 | 39.39 |
| TraesCS6A01G005800.1 | Wheat | cytosol | 49.06 | 39.39 |
| Zm00001d053862_P001 | Maize | cytosol | 46.23 | 39.2 |
| TraesCS6D01G008300.1 | Wheat | cytosol | 49.06 | 38.81 |
| TraesCS6B01G011300.1 | Wheat | cytosol | 49.06 | 38.81 |
| HORVU6Hr1G000090.2 | Barley | cytosol | 47.17 | 38.76 |
| TraesCS6B01G011400.1 | Wheat | cytosol | 48.11 | 38.64 |
| TraesCS6D01G008400.1 | Wheat | cytosol | 48.11 | 38.06 |
| TraesCS6A01G005700.1 | Wheat | cytosol | 48.11 | 38.06 |
| HORVU6Hr1G024770.2 | Barley | cytosol | 46.23 | 36.84 |
| Os12t0428000-01 | Rice | extracellular | 48.11 | 36.43 |
| GSMUA_Achr5P18880_001 | Banana | endoplasmic reticulum | 47.17 | 35.71 |
| TraesCS6A01G129500.1 | Wheat | cytosol | 45.28 | 35.56 |
| TraesCS6D01G118800.1 | Wheat | cytosol | 44.34 | 35.34 |
| HORVU6Hr1G000130.1 | Barley | cytosol | 44.34 | 35.07 |
| CDY49429 | Canola | cytosol | 46.23 | 34.75 |
| Bra002059.1-P | Field mustard | cytosol | 45.28 | 34.04 |
| CDY24335 | Canola | cytosol | 45.28 | 34.04 |
| TraesCS6D01G008600.1 | Wheat | cytosol | 42.45 | 33.09 |
| TraesCS6A01G005900.1 | Wheat | cytosol | 42.45 | 32.85 |
| KRH24034 | Soybean | cytosol | 44.34 | 32.41 |
| TraesCS6B01G011500.1 | Wheat | cytosol | 41.51 | 32.35 |
| HORVU6Hr1G000070.1 | Barley | cytosol | 41.51 | 32.35 |
| AT2G21045.1 | Thale cress | mitochondrion | 46.23 | 28.99 |
| KXG29509 | Sorghum | cytosol | 48.11 | 27.13 |
| GSMUA_Achr8P19470_001 | Banana | mitochondrion | 20.75 | 25.58 |
| GSMUA_Achr11P... | Banana | mitochondrion | 36.79 | 24.53 |
| GSMUA_Achr8P34150_001 | Banana | plastid | 37.74 | 21.86 |
| GSMUA_Achr11P... | Banana | cytosol | 23.58 | 18.8 |
| PGSC0003DMT400069454 | Potato | cytosol | 33.02 | 13.78 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr11P01100_001 | EnsemblPlants:GSMUA_Achr11T01100_001 | EnsemblPlantsGene:GSMUA_Achr11G01100_001 | Gene3D:3.40.250.10 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008150 | GO:GO:0030611 | GO:GO:0071722 | InterPro:IPR001763 | InterPro:IPR036873 | InterPro:Rhodanese-like_dom |
| InterPro:Rhodanese-like_dom_sf | PANTHER:PTHR44542 | PFAM:PF00581 | PFscan:PS50206 | SUPFAM:SSF52821 | UniParc:UPI000296DD5D |
| UniProt:M0RNE1 | MapMan:35.1 | : | : | : | : |
Description
rhodanese-like domain containing protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr11G01100_001]
Coordinates
chr11:+:748514..749504
Molecular Weight (calculated)
11740.0 Da
IEP (calculated)
5.169
GRAVY (calculated)
-0.108
Length
106 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVQKSAVDI VTVDGHEARG LVASGNRYLD VRLEEDFEKG HVEGALNIPY YSSVTPQEKV KNPRFIEQVS SLFGKDEVFI VGCRSGVRAK RATVDLLDAV
101: SLNILF
101: SLNILF
001: MYTYSLLNLS HCRRQTRKKR KTDHTEGFLM EETKPKTVED VETVDVYTAK GFLSTGHRYL DVRTNEEFAK SHVEEALNIP YMFKTDEGRV INPDFLSQVA
101: SVCKKDEHLI VACNAGGRGS RACVDLLNEG YDHVANMGGG YSAWVDAGFA GDKPPEDLKI ACKFRPKEN
101: SVCKKDEHLI VACNAGGRGS RACVDLLNEG YDHVANMGGG YSAWVDAGFA GDKPPEDLKI ACKFRPKEN
Arabidopsis Description
HAC1Protein HIGH ARSENIC CONTENT 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8RUD6]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.