CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os06t0725000-01	Rice	cytosol	45.95	59.03
TraesCS7A01G545200.1	Wheat	cytosol	44.86	58.87
AT5G66040.1	Thale cress	cytosol	34.05	52.5
CDY18582	Canola	cytosol	35.14	52.42
CDX69162	Canola	plastid	42.16	51.66
CDX81421	Canola	cytosol	34.59	51.61
TraesCS7B01G414600.1	Wheat	plastid	51.35	51.35
TraesCS7A01G545100.1	Wheat	plastid	50.81	50.81
TraesCS7B01G467800.2	Wheat	plastid	50.81	50.54
Bra037191.1-P	Field mustard	cytosol	33.51	50.0
TraesCS7D01G531400.1	Wheat	plastid	49.73	49.73
EER90414	Sorghum	plastid	55.14	49.28
TraesCS7D01G531800.1	Wheat	plastid	50.27	48.69
GSMUA_Achr11P...	Banana	cytosol	34.05	47.37
TraesCS7B01G019600.1	Wheat	plastid	50.27	47.21
GSMUA_Achr11P...	Banana	mitochondrion	40.54	47.17
TraesCS7D01G531600.1	Wheat	plastid	48.11	45.88
TraesCSU01G099000.1	Wheat	plastid	41.08	45.51
Bra011636.1-P	Field mustard	plastid	41.62	42.31
HORVU0Hr1G022680.1	Barley	plastid	54.05	42.19
PGSC0003DMT400009432	Potato	plastid	42.16	41.94
CDX75524	Canola	plastid	41.08	41.76
VIT_00s0684g00030.t01	Wine grape	plastid	40.54	41.44
KRH76577	Soybean	nucleus	40.54	40.32
Solyc02g083280.2.1	Tomato	plastid	40.0	39.78
AT4G35770.1	Thale cress	plastid	38.92	39.56
HORVU0Hr1G022690.3	Barley	cytosol	49.73	39.48
TraesCSU01G225200.1	Wheat	plastid	33.51	36.47
KRH28873	Soybean	endoplasmic reticulum	38.92	32.29
KXG25929	Sorghum	endoplasmic reticulum	32.97	31.28
TraesCS7B01G468400.1	Wheat	mitochondrion	42.7	30.38
TraesCS7B01G468600.1	Wheat	mitochondrion	42.7	30.38
EES06099	Sorghum	cytosol	25.95	26.67
KXG29509	Sorghum	cytosol	23.24	22.87

Protein Annotations

EnsemblPlants:EER90413	EnsemblPlantsGene:SORBI_3010G270200	EntrezGene:8069212	Gene3D:3.40.250.10	InterPro:IPR001763	InterPro:IPR036873
InterPro:Rhodanese-like_dom	InterPro:Rhodanese-like_dom_sf	PANTHER:PTHR45431	PFAM:PF00581	PFscan:PS50206	ProteinID:EER90413
ProteinID:EER90413.1	RefSeq:XP_002439046.1	SEG:seg	SMART:SM00450	SUPFAM:SSF52821	UniParc:UPI0001A898C2
UniProt:C5Z1Z2	MapMan:35.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:60458789..60461306

Molecular Weight (calculated)

19536.1 Da

IEP (calculated)

9.759

GRAVY (calculated)

-0.061

Length

185 amino acids

Sequence
(BLAST)

001: MAATLARVSF PAALRRALAS RPRRHSAAGA RVCRFDAAAS AKETAGGSLV NVRHTSVGGD GVLQAEEAAA VPVRSVPVRV AYELQQAGHR YLDVRTESEF
101: SAGHPERAVN IPYLFRAVTG TTKNTCFLEQ VASIFGKDDG IIIGCQSGRR SLMAATELSS AGFTTVTDVA GGFSSWRENG LPITQ

Best Arabidopsis Sequence Match ( AT4G35770.1 )
(BLAST)

001: METTAFNTTS RIGNWSSAIS PPLQTCGSFK CQLPTRRGVI VADLRNSNFR WRKATTTSRG NVAAEAVKIP TSVPVRVARE LAQAGYRYLD VRTPDEFSIG
101: HPTRAINVPY MYRVGSGMVK NPSFLRQVSS HFRKHDEIII GCESGQMSFM ASTDLLTAGF TAITDIAGGY VAWTENELPV EE

Arabidopsis Description

STR15SEN1 [Source:UniProtKB/TrEMBL;Acc:A0A178UYD5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.