CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

plastid 3
mitochondrion 2
endoplasmic reticulum 3
extracellular 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	mitochondrion
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH76577	Soybean	nucleus	67.71	81.18
AT5G66040.1	Thale cress	cytosol	32.74	60.83
CDY18582	Canola	cytosol	32.74	58.87
CDX81421	Canola	cytosol	32.29	58.06
Bra037191.1-P	Field mustard	cytosol	31.84	57.26
CDX69162	Canola	plastid	37.67	55.63
VIT_00s0684g00030.t01	Wine grape	plastid	44.39	54.7
Os06t0725000-01	Rice	cytosol	34.53	53.47
Solyc02g083280.2.1	Tomato	plastid	42.6	51.08
GSMUA_Achr11P...	Banana	mitochondrion	36.32	50.94
PGSC0003DMT400009432	Potato	plastid	42.15	50.54
TraesCS7A01G545200.1	Wheat	cytosol	31.39	49.65
GSMUA_Achr8P34150_001	Banana	plastid	39.01	47.54
CDX75524	Canola	plastid	37.67	46.15
Bra011636.1-P	Field mustard	plastid	37.22	45.6
GSMUA_Achr11P...	Banana	cytosol	26.46	44.36
AT4G35770.1	Thale cress	plastid	34.98	42.86
TraesCS7D01G531400.1	Wheat	plastid	34.53	41.62
Zm00001d014816_P001	Maize	plastid	35.43	41.36
TraesCS7D01G531600.1	Wheat	plastid	35.87	41.24
TraesCS7A01G545100.1	Wheat	plastid	34.08	41.08
TraesCS7B01G414600.1	Wheat	plastid	33.63	40.54
TraesCS7B01G467800.2	Wheat	plastid	33.18	39.78
EER90413	Sorghum	mitochondrion	32.29	38.92
TraesCS7D01G531800.1	Wheat	plastid	32.74	38.22
TraesCS7B01G019600.1	Wheat	plastid	33.63	38.07
TraesCSU01G099000.1	Wheat	plastid	28.25	37.72
EER90414	Sorghum	plastid	34.98	37.68
KRH28807	Soybean	endoplasmic reticulum	22.87	34.23
KRH76647	Soybean	endoplasmic reticulum	22.42	33.56
KRH08053	Soybean	cytosol	23.32	33.12
KRH69767	Soybean	cytosol	22.87	32.28
HORVU0Hr1G022690.3	Barley	cytosol	33.18	31.76
KRH24034	Soybean	cytosol	20.63	31.72
TraesCSU01G225200.1	Wheat	plastid	23.77	31.18
HORVU0Hr1G022680.1	Barley	plastid	32.74	30.8
TraesCS7B01G468400.1	Wheat	mitochondrion	29.6	25.38
TraesCS7B01G468600.1	Wheat	mitochondrion	29.6	25.38

Protein Annotations

EMBL:ACUP02006769	EnsemblPlants:KRH28873	EnsemblPlantsGene:GLYMA_11G082300	Gene3D:3.40.250.10	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:IPR001763	InterPro:IPR036873	InterPro:Rhodanese-like_dom	InterPro:Rhodanese-like_dom_sf	PANTHER:PTHR45431
PFAM:PF00581	PFscan:PS50206	ProteinID:KRH28873	ProteinID:KRH28873.1	SEG:seg	SMART:SM00450
SUPFAM:SSF52821	TMHMM:TMhelix	UniParc:UPI000296000A	UniProt:K7LNM8	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr11:-:6185688..6188813

Molecular Weight (calculated)

24468.6 Da

IEP (calculated)

9.065

GRAVY (calculated)

0.098

Length

223 amino acids

Sequence
(BLAST)

001: MKAMTATTTF DVSAACFRAP PSCSPNPCHT RSTNFTIFFY TNSTMLFLSL SLSLFLFFFI KLCSVHTCSF SVINSLNPHK GRRISVAVPP KFPSFRREAA
101: LQGNLEAVRV PTSVPVRVAY ELLLAGHRYL DVRTPEEFNA GHAPGAINIP YMFRVGSGMT KNSNFIREVS SNFRKEDEII VGCELGKRSM MAASDLLAAG
201: FTGLTDMAGG YAAWTQNGLP TEL

Best Arabidopsis Sequence Match ( AT4G35770.1 )
(BLAST)

001: METTAFNTTS RIGNWSSAIS PPLQTCGSFK CQLPTRRGVI VADLRNSNFR WRKATTTSRG NVAAEAVKIP TSVPVRVARE LAQAGYRYLD VRTPDEFSIG
101: HPTRAINVPY MYRVGSGMVK NPSFLRQVSS HFRKHDEIII GCESGQMSFM ASTDLLTAGF TAITDIAGGY VAWTENELPV EE

Arabidopsis Description

STR15SEN1 [Source:UniProtKB/TrEMBL;Acc:A0A178UYD5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.