Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G545100.1 | Wheat | plastid | 89.22 | 80.54 |
| TraesCS7D01G531400.1 | Wheat | plastid | 88.62 | 80.0 |
| TraesCS7B01G414600.1 | Wheat | plastid | 88.02 | 79.46 |
| TraesCS7B01G467800.2 | Wheat | plastid | 82.63 | 74.19 |
| HORVU0Hr1G022680.1 | Barley | plastid | 82.63 | 58.23 |
| Os06t0725000-01 | Rice | cytosol | 44.31 | 51.39 |
| TraesCSU01G225200.1 | Wheat | plastid | 50.9 | 50.0 |
| AT5G66040.1 | Thale cress | cytosol | 34.13 | 47.5 |
| CDX69162 | Canola | plastid | 38.32 | 42.38 |
| CDY18582 | Canola | cytosol | 31.14 | 41.94 |
| CDX81421 | Canola | cytosol | 31.14 | 41.94 |
| EER90413 | Sorghum | mitochondrion | 45.51 | 41.08 |
| Bra037191.1-P | Field mustard | cytosol | 29.34 | 39.52 |
| Zm00001d014816_P001 | Maize | plastid | 44.91 | 39.27 |
| EER90414 | Sorghum | plastid | 46.71 | 37.68 |
| AT4G35770.1 | Thale cress | plastid | 40.72 | 37.36 |
| CDX75524 | Canola | plastid | 40.12 | 36.81 |
| GSMUA_Achr11P... | Banana | mitochondrion | 34.73 | 36.48 |
| Bra011636.1-P | Field mustard | plastid | 38.92 | 35.71 |
| KRH76577 | Soybean | nucleus | 38.92 | 34.95 |
| GSMUA_Achr11P... | Banana | cytosol | 27.54 | 34.59 |
| PGSC0003DMT400009432 | Potato | plastid | 37.72 | 33.87 |
| Solyc02g083280.2.1 | Tomato | plastid | 37.72 | 33.87 |
| VIT_00s0684g00030.t01 | Wine grape | plastid | 36.53 | 33.7 |
| KRH28873 | Soybean | endoplasmic reticulum | 37.72 | 28.25 |
Protein Annotations
| EnsemblPlants:TraesCSU01G099000.1 | EnsemblPlantsGene:TraesCSU01G099000 | Gene3D:3.40.250.10 | InterPro:IPR001763 | InterPro:IPR036873 | InterPro:Rhodanese-like_dom |
| InterPro:Rhodanese-like_dom_sf | PANTHER:PTHR45431 | PFscan:PS50206 | SEG:seg | SUPFAM:SSF52821 | TIGR:cd00158 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chrUn:+:87746746..87748291
Molecular Weight (calculated)
17455.1 Da
IEP (calculated)
9.634
GRAVY (calculated)
0.114
Length
167 amino acids
Sequence
(BLAST)
(BLAST)
001: MASASFIARC VSVPARLIAN PTPLAITTCR LRRLGAVGAR PVCAAGRMLG SVRYGTGAAS GPKEANAEVA AVPPSVPVRV AYKLQLAGHR YLDVRTEGEF
101: GGGHPAGAVN ISYMHSTGSG MAKNSGFLEQ VSAIFRREDE IIIGFTGVTD IAGGFLAWKE NELPINQ
101: GGGHPAGAVN ISYMHSTGSG MAKNSGFLEQ VSAIFRREDE IIIGFTGVTD IAGGFLAWKE NELPINQ
001: METTAFNTTS RIGNWSSAIS PPLQTCGSFK CQLPTRRGVI VADLRNSNFR WRKATTTSRG NVAAEAVKIP TSVPVRVARE LAQAGYRYLD VRTPDEFSIG
101: HPTRAINVPY MYRVGSGMVK NPSFLRQVSS HFRKHDEIII GCESGQMSFM ASTDLLTAGF TAITDIAGGY VAWTENELPV EE
101: HPTRAINVPY MYRVGSGMVK NPSFLRQVSS HFRKHDEIII GCESGQMSFM ASTDLLTAGF TAITDIAGGY VAWTENELPV EE
Arabidopsis Description
STR15SEN1 [Source:UniProtKB/TrEMBL;Acc:A0A178UYD5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.