Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G531400.1 | Wheat | plastid | 95.14 | 95.14 |
| TraesCS7B01G414600.1 | Wheat | plastid | 91.89 | 91.89 |
| TraesCSU01G099000.1 | Wheat | plastid | 80.54 | 89.22 |
| TraesCS7B01G467800.2 | Wheat | plastid | 82.16 | 81.72 |
| HORVU0Hr1G022680.1 | Barley | plastid | 87.03 | 67.93 |
| TraesCS7A01G545200.1 | Wheat | cytosol | 49.73 | 65.25 |
| Os06t0725000-01 | Rice | cytosol | 49.73 | 63.89 |
| AT5G66040.1 | Thale cress | cytosol | 37.3 | 57.5 |
| CDY18582 | Canola | cytosol | 36.76 | 54.84 |
| CDX81421 | Canola | cytosol | 36.76 | 54.84 |
| Bra037191.1-P | Field mustard | cytosol | 35.68 | 53.23 |
| CDX69162 | Canola | plastid | 42.16 | 51.66 |
| EER90413 | Sorghum | mitochondrion | 50.81 | 50.81 |
| Zm00001d014816_P001 | Maize | plastid | 49.73 | 48.17 |
| EER90414 | Sorghum | plastid | 53.51 | 47.83 |
| GSMUA_Achr11P... | Banana | mitochondrion | 39.46 | 45.91 |
| GSMUA_Achr11P... | Banana | cytosol | 31.89 | 44.36 |
| CDX75524 | Canola | plastid | 43.24 | 43.96 |
| Bra011636.1-P | Field mustard | plastid | 42.7 | 43.41 |
| AT4G35770.1 | Thale cress | plastid | 42.7 | 43.41 |
| VIT_00s0684g00030.t01 | Wine grape | plastid | 41.08 | 41.99 |
| KRH76577 | Soybean | nucleus | 41.62 | 41.4 |
| PGSC0003DMT400009432 | Potato | plastid | 41.62 | 41.4 |
| Solyc02g083280.2.1 | Tomato | plastid | 41.62 | 41.4 |
| KRH28873 | Soybean | endoplasmic reticulum | 41.08 | 34.08 |
| TraesCS6A01G005700.1 | Wheat | cytosol | 23.78 | 32.84 |
| TraesCS6A01G129500.1 | Wheat | cytosol | 23.78 | 32.59 |
| TraesCS6A01G005800.1 | Wheat | cytosol | 22.7 | 31.82 |
| TraesCS6A01G005900.1 | Wheat | cytosol | 22.16 | 29.93 |
| TraesCS6A01G106000.3 | Wheat | cytosol, plastid | 31.35 | 27.88 |
| TraesCS7A01G151200.1 | Wheat | cytosol | 30.81 | 26.89 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G545100.1 | EnsemblPlantsGene:TraesCS7A01G545100 | Gene3D:3.40.250.10 | InterPro:IPR001763 | InterPro:IPR036873 | InterPro:Rhodanese-like_dom |
| InterPro:Rhodanese-like_dom_sf | PANTHER:PTHR45431 | PFAM:PF00581 | PFscan:PS50206 | SEG:seg | SMART:SM00450 |
| SUPFAM:SSF52821 | TIGR:cd00158 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr7A:+:721204810..721206352
Molecular Weight (calculated)
19299.2 Da
IEP (calculated)
9.001
GRAVY (calculated)
0.008
Length
185 amino acids
Sequence
(BLAST)
(BLAST)
001: MASACFLARC VSVPARLLAN PTPLAITTCR LRRHGAAGAR PVRAAGRMLG SVRYGTGAAL GPKEAGAEVA AVPPSVPVRV AYELQLAGHR YLDVRTEGEF
101: GGGHPAGAVN IPYMHSTGSG MAKNSGFLEQ VSAIFRREDE IIIGCQSGRR SLMAAAELCS AGYTGVTDIA GGYSAWKENE LPINQ
101: GGGHPAGAVN IPYMHSTGSG MAKNSGFLEQ VSAIFRREDE IIIGCQSGRR SLMAAAELCS AGYTGVTDIA GGYSAWKENE LPINQ
001: METTAFNTTS RIGNWSSAIS PPLQTCGSFK CQLPTRRGVI VADLRNSNFR WRKATTTSRG NVAAEAVKIP TSVPVRVARE LAQAGYRYLD VRTPDEFSIG
101: HPTRAINVPY MYRVGSGMVK NPSFLRQVSS HFRKHDEIII GCESGQMSFM ASTDLLTAGF TAITDIAGGY VAWTENELPV EE
101: HPTRAINVPY MYRVGSGMVK NPSFLRQVSS HFRKHDEIII GCESGQMSFM ASTDLLTAGF TAITDIAGGY VAWTENELPV EE
Arabidopsis Description
STR15SEN1 [Source:UniProtKB/TrEMBL;Acc:A0A178UYD5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.