Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G034280.1 | Barley | cytosol | 53.37 | 88.1 |
| TraesCS7B01G055200.2 | Wheat | cytosol | 77.4 | 81.31 |
| TraesCS7A01G151200.1 | Wheat | cytosol | 77.4 | 75.94 |
| HORVU7Hr1G031140.6 | Barley | plastid | 65.38 | 69.74 |
| TraesCS7D01G153100.3 | Wheat | cytosol, plastid | 65.38 | 63.26 |
| Os02t0102300-01 | Rice | cytosol | 37.02 | 56.2 |
| EES06099 | Sorghum | cytosol | 37.5 | 43.33 |
| TraesCS6A01G005800.1 | Wheat | cytosol | 25.0 | 39.39 |
| TraesCS7A01G545200.1 | Wheat | cytosol | 26.44 | 39.01 |
| TraesCS6A01G005700.1 | Wheat | cytosol | 25.0 | 38.81 |
| Bra002059.1-P | Field mustard | cytosol | 25.96 | 38.3 |
| CDY24335 | Canola | cytosol | 25.96 | 38.3 |
| CDY49429 | Canola | cytosol | 25.48 | 37.59 |
| KRH24034 | Soybean | cytosol | 25.96 | 37.24 |
| TraesCS6A01G005900.1 | Wheat | cytosol | 23.56 | 35.77 |
| TraesCS6A01G129500.1 | Wheat | cytosol | 23.08 | 35.56 |
| AT2G21045.1 | Thale cress | mitochondrion | 26.92 | 33.14 |
| TraesCS7A01G545100.1 | Wheat | plastid | 27.88 | 31.35 |
| PGSC0003DMT400069454 | Potato | cytosol | 22.12 | 18.11 |
Protein Annotations
| EnsemblPlants:TraesCS6A01G106000.3 | EnsemblPlantsGene:TraesCS6A01G106000 | Gene3D:3.40.250.10 | InterPro:IPR001763 | InterPro:IPR036873 | InterPro:Rhodanese-like_dom |
| InterPro:Rhodanese-like_dom_sf | PANTHER:PTHR44542 | PANTHER:PTHR44542:SF3 | PFAM:PF00581 | PFscan:PS50206 | SEG:seg |
| SMART:SM00450 | SUPFAM:SSF52821 | TIGR:cd00158 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr6A:-:74106819..74108445
Molecular Weight (calculated)
22181.3 Da
IEP (calculated)
4.553
GRAVY (calculated)
-0.074
Length
208 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRSESAPGA APAVVVKTVD LQTAATPDVG ATTVDVQTTV APDVGVTTVD VQMAAARAVA VTTVDVQTAA RELQEQQDGM MYLDVRTEEE MGKGHIRGSL
101: NVPYFFVTPQ GTREKNPRFV EQVASLFSTD QHILVLYYYT TTTNHPWMEE QGCQSGKRSE LACIDLLAAG FMNVKNVGGG YAAWLHNGLP VTVAVPTPPP
201: TPESAAAI
101: NVPYFFVTPQ GTREKNPRFV EQVASLFSTD QHILVLYYYT TTTNHPWMEE QGCQSGKRSE LACIDLLAAG FMNVKNVGGG YAAWLHNGLP VTVAVPTPPP
201: TPESAAAI
001: MSQSISSSTK AEEVVSVDVS QAKTLLQSGH QYLDVRTQDE FRRGHCEAAK IVNIPYMLNT PQGRVKNQEF LEQVSSLLNP ADDILVGCQS GARSLKATTE
101: LVAAGYKKVR NVGGGYLAWV DHSFPINTEE EEPSAN
101: LVAAGYKKVR NVGGGYLAWV DHSFPINTEE EEPSAN
Arabidopsis Description
STR18Sulfurtransferase 18 [Source:UniProtKB/TrEMBL;Acc:F4JZ39]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.