Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os06t0725000-01 | Rice | cytosol | 64.54 | 63.19 |
| TraesCS7B01G019600.1 | Wheat | plastid | 80.14 | 57.36 |
| TraesCS7D01G531600.1 | Wheat | plastid | 75.89 | 55.15 |
| CDY18582 | Canola | cytosol | 47.52 | 54.03 |
| CDX81421 | Canola | cytosol | 46.81 | 53.23 |
| AT5G66040.1 | Thale cress | cytosol | 44.68 | 52.5 |
| Bra037191.1-P | Field mustard | cytosol | 44.68 | 50.81 |
| Zm00001d014816_P001 | Maize | plastid | 68.79 | 50.79 |
| TraesCS7A01G545100.1 | Wheat | plastid | 65.25 | 49.73 |
| CDX69162 | Canola | plastid | 51.77 | 48.34 |
| GSMUA_Achr11P... | Banana | mitochondrion | 53.9 | 47.8 |
| EER90414 | Sorghum | plastid | 69.5 | 47.34 |
| EER90413 | Sorghum | mitochondrion | 58.87 | 44.86 |
| PGSC0003DMT400009432 | Potato | plastid | 54.61 | 41.4 |
| GSMUA_Achr11P... | Banana | cytosol | 38.3 | 40.6 |
| VIT_00s0684g00030.t01 | Wine grape | plastid | 51.77 | 40.33 |
| Solyc02g083280.2.1 | Tomato | plastid | 53.19 | 40.32 |
| AT4G35770.1 | Thale cress | plastid | 50.35 | 39.01 |
| Bra011636.1-P | Field mustard | plastid | 50.35 | 39.01 |
| CDX75524 | Canola | plastid | 49.65 | 38.46 |
| KRH76577 | Soybean | nucleus | 48.94 | 37.1 |
| KRH28873 | Soybean | endoplasmic reticulum | 49.65 | 31.39 |
| TraesCS6A01G005700.1 | Wheat | cytosol | 29.79 | 31.34 |
| TraesCS6A01G129500.1 | Wheat | cytosol | 29.08 | 30.37 |
| TraesCS6A01G005800.1 | Wheat | cytosol | 28.37 | 30.3 |
| TraesCS6A01G005900.1 | Wheat | cytosol | 29.08 | 29.93 |
| TraesCS6A01G106000.3 | Wheat | cytosol, plastid | 39.01 | 26.44 |
| TraesCS7A01G151200.1 | Wheat | cytosol | 36.88 | 24.53 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G545200.1 | EnsemblPlantsGene:TraesCS7A01G545200 | Gene3D:3.40.250.10 | InterPro:IPR001763 | InterPro:IPR036873 | InterPro:Rhodanese-like_dom |
| InterPro:Rhodanese-like_dom_sf | PANTHER:PTHR45431 | PFAM:PF00581 | PFscan:PS50206 | SEG:seg | SMART:SM00450 |
| SUPFAM:SSF52821 | TIGR:cd00158 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr7A:+:721222769..721225579
Molecular Weight (calculated)
14702.3 Da
IEP (calculated)
4.838
GRAVY (calculated)
-0.101
Length
141 amino acids
Sequence
(BLAST)
(BLAST)
001: MPNSHTLAPS SPDTAAPGRA EDSEVAVPAS VPVRVAYEMQ LAGHRYLDVR TEGEFGGGRP AGAVNIPYMY STGSGMAKNP HFLEQVSAIF GSDDELIIGC
101: QSGKRSLMAA AELCSAGFTA VTDIAGGFST WRENGLPVIG R
101: QSGKRSLMAA AELCSAGFTA VTDIAGGFST WRENGLPVIG R
001: METTAFNTTS RIGNWSSAIS PPLQTCGSFK CQLPTRRGVI VADLRNSNFR WRKATTTSRG NVAAEAVKIP TSVPVRVARE LAQAGYRYLD VRTPDEFSIG
101: HPTRAINVPY MYRVGSGMVK NPSFLRQVSS HFRKHDEIII GCESGQMSFM ASTDLLTAGF TAITDIAGGY VAWTENELPV EE
101: HPTRAINVPY MYRVGSGMVK NPSFLRQVSS HFRKHDEIII GCESGQMSFM ASTDLLTAGF TAITDIAGGY VAWTENELPV EE
Arabidopsis Description
STR15SEN1 [Source:UniProtKB/TrEMBL;Acc:A0A178UYD5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.