Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G034280.1 | Barley | cytosol | 52.36 | 88.1 |
| TraesCS7B01G055200.2 | Wheat | cytosol | 75.0 | 80.3 |
| TraesCS6A01G106000.3 | Wheat | cytosol, plastid | 75.94 | 77.4 |
| HORVU7Hr1G031140.6 | Barley | plastid | 66.51 | 72.31 |
| Os02t0102300-01 | Rice | cytosol | 36.79 | 56.93 |
| EES06099 | Sorghum | cytosol | 37.26 | 43.89 |
| Bra002059.1-P | Field mustard | cytosol | 26.42 | 39.72 |
| CDY24335 | Canola | cytosol | 26.42 | 39.72 |
| TraesCS6A01G005700.1 | Wheat | cytosol | 25.0 | 39.55 |
| CDY49429 | Canola | cytosol | 25.94 | 39.01 |
| TraesCS6A01G005800.1 | Wheat | cytosol | 24.06 | 38.64 |
| KRH24034 | Soybean | cytosol | 26.42 | 38.62 |
| TraesCS7A01G545200.1 | Wheat | cytosol | 24.53 | 36.88 |
| TraesCS6A01G129500.1 | Wheat | cytosol | 23.11 | 36.3 |
| TraesCS6A01G005900.1 | Wheat | cytosol | 22.17 | 34.31 |
| AT2G21045.1 | Thale cress | mitochondrion | 26.42 | 33.14 |
| TraesCS7A01G545100.1 | Wheat | plastid | 26.89 | 30.81 |
| PGSC0003DMT400069454 | Potato | cytosol | 23.11 | 19.29 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G151200.1 | EnsemblPlantsGene:TraesCS7A01G151200 | Gene3D:3.40.250.10 | InterPro:IPR001763 | InterPro:IPR036873 | InterPro:Rhodanese-like_dom |
| InterPro:Rhodanese-like_dom_sf | PANTHER:PTHR44542 | PANTHER:PTHR44542:SF3 | PFAM:PF00581 | PFscan:PS50206 | SEG:seg |
| SMART:SM00450 | SUPFAM:SSF52821 | TIGR:cd00158 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr7A:+:105244322..105247510
Molecular Weight (calculated)
22146.3 Da
IEP (calculated)
4.373
GRAVY (calculated)
-0.045
Length
212 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPPPHENEM TRSESAPATA VKTVDVQTAA TPAVGVTPVD VQTAATPAVG VTTVDVQTVT PPAVGVTTVD VQTVTPPAVG VTTVDVQTAA RELQEQQDGM
101: MYLDVRTEEE MGKGHIGGSL NVPYFFVTPQ GTREKNPRFV EQVASLYTTE QHILVGCQSG KRSELACVDL LAAGFMNVKN VGGGYAAWLH NGLPVTVAVP
201: TPPPTPESAA AI
101: MYLDVRTEEE MGKGHIGGSL NVPYFFVTPQ GTREKNPRFV EQVASLYTTE QHILVGCQSG KRSELACVDL LAAGFMNVKN VGGGYAAWLH NGLPVTVAVP
201: TPPPTPESAA AI
001: MYTYSLLNLS HCRRQTRKKR KTDHTEGFLM EETKPKTVED VETVDVYTAK GFLSTGHRYL DVRTNEEFAK SHVEEALNIP YMFKTDEGRV INPDFLSQVA
101: SVCKKDEHLI VACNAGGRGS RACVDLLNEG YDHVANMGGG YSAWVDAGFA GDKPPEDLKI ACKFRPKEN
101: SVCKKDEHLI VACNAGGRGS RACVDLLNEG YDHVANMGGG YSAWVDAGFA GDKPPEDLKI ACKFRPKEN
Arabidopsis Description
HAC1Protein HIGH ARSENIC CONTENT 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8RUD6]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.