Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G034280.1 | Barley | cytosol | 64.62 | 100.0 |
| TraesCS7B01G055200.2 | Wheat | cytosol | 71.28 | 70.2 |
| TraesCS7A01G151200.1 | Wheat | cytosol | 72.31 | 66.51 |
| TraesCS6A01G106000.3 | Wheat | cytosol, plastid | 69.74 | 65.38 |
| TraesCS7D01G153100.3 | Wheat | cytosol, plastid | 63.08 | 57.21 |
| Os02t0102300-01 | Rice | cytosol | 38.46 | 54.74 |
| EES06099 | Sorghum | cytosol | 38.97 | 42.22 |
| HORVU6Hr1G000090.2 | Barley | cytosol | 26.15 | 39.53 |
| CDY24335 | Canola | cytosol | 28.21 | 39.01 |
| Bra002059.1-P | Field mustard | cytosol | 28.21 | 39.01 |
| CDY49429 | Canola | cytosol | 27.69 | 38.3 |
| HORVU6Hr1G000130.1 | Barley | cytosol | 25.64 | 37.31 |
| KRH24034 | Soybean | cytosol | 27.69 | 37.24 |
| HORVU6Hr1G024770.2 | Barley | cytosol | 24.62 | 36.09 |
| HORVU6Hr1G000070.1 | Barley | cytosol | 24.62 | 35.29 |
| AT2G21045.1 | Thale cress | mitochondrion | 29.74 | 34.32 |
| HORVU0Hr1G022680.1 | Barley | plastid | 30.26 | 24.89 |
| HORVU0Hr1G022690.3 | Barley | cytosol | 28.72 | 24.03 |
| PGSC0003DMT400069454 | Potato | cytosol | 23.59 | 18.11 |
Protein Annotations
| EnsemblPlants:HORVU7Hr1G031140.6 | EnsemblPlantsGene:HORVU7Hr1G031140 | Gene3D:3.40.250.10 | InterPro:IPR001763 | InterPro:IPR036873 | InterPro:Rhodanese-like_dom |
| InterPro:Rhodanese-like_dom_sf | PANTHER:PTHR44542 | PANTHER:PTHR44542:SF3 | PFAM:PF00581 | PFscan:PS50206 | SEG:seg |
| SMART:SM00450 | SUPFAM:SSF52821 | UniParc:UPI000B4762E8 | UniProt:A0A287VXC4 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chrchr7H:-:62877724..62878855
Molecular Weight (calculated)
20349.0 Da
IEP (calculated)
4.531
GRAVY (calculated)
-0.049
Length
195 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPPPHENEM SSLRSGLTSL ISNCRSGSSE SAPATAVKTV DVQTAETPAV GVTTVDVQTA ATPAVGVTTV DVQTAARELQ EQQGGMAYLD VRTEEEMGKG
101: HVVGGSLNVP YFFVTPQGTR EKNPRFVEQV ASLFTTDQHI LIGCQSGKRS ELACVDLLAA GFMNVKNVGG GYAAWLQSGL PVTVAVPTPE SAAEI
101: HVVGGSLNVP YFFVTPQGTR EKNPRFVEQV ASLFTTDQHI LIGCQSGKRS ELACVDLLAA GFMNVKNVGG GYAAWLQSGL PVTVAVPTPE SAAEI
001: MSQSISSSTK AEEVVSVDVS QAKTLLQSGH QYLDVRTQDE FRRGHCEAAK IVNIPYMLNT PQGRVKNQEF LEQVSSLLNP ADDILVGCQS GARSLKATTE
101: LVAAGYKKVR NVGGGYLAWV DHSFPINTEE EEPSAN
101: LVAAGYKKVR NVGGGYLAWV DHSFPINTEE EEPSAN
Arabidopsis Description
STR18Sulfurtransferase 18 [Source:UniProtKB/TrEMBL;Acc:F4JZ39]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.