Factsheet for HORVU0Hr1G022680.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
TargetP:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G414600.1	Wheat	plastid	67.93	87.03
TraesCS7A01G545100.1	Wheat	plastid	67.93	87.03
TraesCS7D01G531400.1	Wheat	plastid	67.09	85.95
TraesCSU01G099000.1	Wheat	plastid	58.23	82.63
TraesCS7B01G467800.2	Wheat	plastid	60.34	76.88
Os06t0725000-01	Rice	cytosol	36.71	60.42
AT5G66040.1	Thale cress	cytosol	29.54	58.33
EER90413	Sorghum	mitochondrion	42.19	54.05
CDY18582	Canola	cytosol	28.27	54.03
CDX81421	Canola	cytosol	27.85	53.23
Bra037191.1-P	Field mustard	cytosol	26.58	50.81
HORVU0Hr1G022690.3	Barley	cytosol	49.79	50.64
CDX69162	Canola	plastid	31.65	49.67
EER90414	Sorghum	plastid	43.04	49.28
Zm00001d014816_P001	Maize	plastid	38.82	48.17
GSMUA_Achr11P...	Banana	mitochondrion	30.8	45.91
GSMUA_Achr11P...	Banana	cytosol	24.89	44.36
CDX75524	Canola	plastid	33.33	43.41
VIT_00s0684g00030.t01	Wine grape	plastid	32.49	42.54
AT4G35770.1	Thale cress	plastid	32.49	42.31
HORVU3Hr1G034280.1	Barley	cytosol	22.36	42.06
Bra011636.1-P	Field mustard	plastid	32.07	41.76
PGSC0003DMT400009432	Potato	plastid	32.49	41.4
Solyc02g083280.2.1	Tomato	plastid	32.49	41.4
KRH76577	Soybean	nucleus	30.8	39.25
KRH28873	Soybean	endoplasmic reticulum	30.8	32.74
HORVU6Hr1G000090.2	Barley	cytosol	16.88	31.01
HORVU6Hr1G000070.1	Barley	cytosol	17.72	30.88
HORVU6Hr1G000130.1	Barley	cytosol	17.3	30.6
HORVU7Hr1G031140.6	Barley	plastid	24.89	30.26
HORVU6Hr1G024770.2	Barley	cytosol	16.46	29.32

Protein Annotations

EnsemblPlants:HORVU0Hr1G022680.1	EnsemblPlantsGene:HORVU0Hr1G022680	Gene3D:3.40.250.10	InterPro:IPR001763	InterPro:IPR036873	InterPro:Rhodanese-like_dom
InterPro:Rhodanese-like_dom_sf	PANTHER:PTHR45431	PFAM:PF00581	PFscan:PS50206	SEG:seg	SignalP:SignalP-noTM
SMART:SM00450	SUPFAM:SSF52821	UniParc:UPI000B46A646	UniProt:A0A287E7W1	MapMan:35.1	:

Description

No Description!

Coordinates

chrchrUn:-:114895700..114897582

Molecular Weight (calculated)

25855.3 Da

IEP (calculated)

11.804

GRAVY (calculated)

-0.232

Length

237 amino acids

Sequence
(BLAST)

001: RNFIWKLSFL PSLVSLCLPS PAPESPRTRR TRRRRTRHRS KRRPRSRRSR DIMASACFIA RCVSVPAHLL AHRTPLAITS CRLRRHGAAG ARSVCAAGRM
101: LGSVRYGTGA GLGSKQADAE VAAVPPSVPV RVAYELQLAG HRYLDVRTEG EFGCGHPAGA VNIPYMHSTG SGMAKNSRFL EQVSVIFRRD DEFIIGCQSG
201: RRSLLAATEL CSAGFTAVTD IAGGFSAWRE NGLPIKQ

Best Arabidopsis Sequence Match ( AT4G35770.1 )
(BLAST)

001: METTAFNTTS RIGNWSSAIS PPLQTCGSFK CQLPTRRGVI VADLRNSNFR WRKATTTSRG NVAAEAVKIP TSVPVRVARE LAQAGYRYLD VRTPDEFSIG
101: HPTRAINVPY MYRVGSGMVK NPSFLRQVSS HFRKHDEIII GCESGQMSFM ASTDLLTAGF TAITDIAGGY VAWTENELPV EE

Arabidopsis Description

STR15SEN1 [Source:UniProtKB/TrEMBL;Acc:A0A178UYD5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.