Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY30783 | Canola | cytosol | 71.01 | 77.78 |
| CDY45212 | Canola | cytosol | 71.01 | 77.78 |
| Bra012056.1-P | Field mustard | cytosol | 72.46 | 76.92 |
| CDY45211 | Canola | cytosol | 72.46 | 76.92 |
| Bra031805.1-P | Field mustard | cytosol | 72.46 | 75.76 |
| CDY57763 | Canola | cytosol | 71.74 | 75.0 |
| CDY55100 | Canola | cytosol | 60.87 | 71.19 |
| Solyc02g083730.2.1 | Tomato | cytosol | 47.83 | 51.16 |
| VIT_04s0023g03600.t01 | Wine grape | cytosol | 49.28 | 51.13 |
| PGSC0003DMT400009210 | Potato | endoplasmic reticulum | 49.28 | 48.57 |
| GSMUA_Achr5P18880_001 | Banana | endoplasmic reticulum | 47.1 | 46.43 |
| KRH08053 | Soybean | cytosol | 51.45 | 45.22 |
| AT5G66040.1 | Thale cress | cytosol | 38.41 | 44.17 |
| GSMUA_Achr8P19470_001 | Banana | mitochondrion | 26.81 | 43.02 |
| KRH28807 | Soybean | endoplasmic reticulum | 46.38 | 42.95 |
| KRH69767 | Soybean | cytosol | 47.83 | 41.77 |
| KRH76647 | Soybean | endoplasmic reticulum | 44.93 | 41.61 |
| VIT_04s0023g03590.t01 | Wine grape | cytosol | 43.48 | 37.74 |
| AT2G17850.3 | Thale cress | endoplasmic reticulum | 42.75 | 31.38 |
| AT2G21045.1 | Thale cress | mitochondrion | 38.41 | 31.36 |
| AT4G35770.1 | Thale cress | plastid | 34.78 | 26.37 |
Protein Annotations
| Gene3D:3.40.250.10 | MapMan:35.1 | EntrezGene:836749 | ProteinID:AED98169.1 | ArrayExpress:AT5G66170 | EnsemblPlantsGene:AT5G66170 |
| RefSeq:AT5G66170 | TAIR:AT5G66170 | RefSeq:AT5G66170-TAIR-G | EnsemblPlants:AT5G66170.2 | TAIR:AT5G66170.2 | UniProt:F4JZ39 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004792 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0016740 | InterPro:IPR001763 | InterPro:IPR036873 | RefSeq:NP_001032159.1 | PFAM:PF00581 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007098 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS50206 | PANTHER:PTHR44542 |
| PANTHER:PTHR44542:SF2 | InterPro:Rhodanese-like_dom | InterPro:Rhodanese-like_dom_sf | SMART:SM00450 | SUPFAM:SSF52821 | Symbol:STR18 |
| UniParc:UPI00005DC199 | : | : | : | : | : |
Description
STR18Sulfurtransferase 18 [Source:UniProtKB/TrEMBL;Acc:F4JZ39]
Coordinates
chr5:+:26447648..26448727
Molecular Weight (calculated)
15069.7 Da
IEP (calculated)
5.191
GRAVY (calculated)
-0.391
Length
138 amino acids
Sequence
(BLAST)
(BLAST)
001: MSQSISSSTK AEEVVSVDVS QAKTLLQSGH QYLDVRTQDE FRRGHCEAAK IVNIPYMLNT PQGRVKNQEF LEQVSSLLNP ADDILVGCQS GARSLKATTE
101: LVAAVSGYKK VRNVGGGYLA WVDHSFPINT EEEEPSAN
101: LVAAVSGYKK VRNVGGGYLA WVDHSFPINT EEEEPSAN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.