Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY45211 | Canola | cytosol | 100.0 | 100.0 |
| Bra031805.1-P | Field mustard | cytosol | 85.38 | 84.09 |
| AT5G66170.2 | Thale cress | cytosol | 76.92 | 72.46 |
| Solyc02g083730.2.1 | Tomato | cytosol | 50.77 | 51.16 |
| PGSC0003DMT400009210 | Potato | endoplasmic reticulum | 53.85 | 50.0 |
| VIT_04s0023g03600.t01 | Wine grape | cytosol | 50.77 | 49.62 |
| GSMUA_Achr5P18880_001 | Banana | endoplasmic reticulum | 52.31 | 48.57 |
| Bra037191.1-P | Field mustard | cytosol | 43.85 | 45.97 |
| KRH08053 | Soybean | cytosol | 52.31 | 43.31 |
| KRH69767 | Soybean | cytosol | 52.31 | 43.04 |
| GSMUA_Achr8P19470_001 | Banana | mitochondrion | 27.69 | 41.86 |
| KRH28807 | Soybean | endoplasmic reticulum | 47.69 | 41.61 |
| KRH76647 | Soybean | endoplasmic reticulum | 47.69 | 41.61 |
| Bra002059.1-P | Field mustard | cytosol | 42.31 | 39.01 |
| VIT_04s0023g03590.t01 | Wine grape | cytosol | 46.92 | 38.36 |
| Bra011636.1-P | Field mustard | plastid | 40.77 | 29.12 |
Protein Annotations
| EnsemblPlants:Bra012056.1 | EnsemblPlants:Bra012056.1-P | EnsemblPlantsGene:Bra012056 | Gene3D:3.40.250.10 | InterPro:IPR001763 | InterPro:IPR036873 |
| InterPro:Rhodanese-like_dom | InterPro:Rhodanese-like_dom_sf | PANTHER:PTHR44542 | PANTHER:PTHR44542:SF2 | PFAM:PF00581 | PFscan:PS50206 |
| SMART:SM00450 | SUPFAM:SSF52821 | UniParc:UPI0002541850 | UniProt:M4D6E7 | MapMan:35.1 | : |
Description
AT5G66170 (E=4e-054) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: aging; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G17850.1); Has 730 Blast hits to 728 proteins in 227 species: Archae - 18; Bacteria - 429; Metazoa - 13; Fungi - 9; Plants - 103; Viruses - 0; Other Eukaryotes - 158 (source: NCBI BLink).
Coordinates
chrA07:-:10263250..10263969
Molecular Weight (calculated)
14318.0 Da
IEP (calculated)
6.513
GRAVY (calculated)
-0.393
Length
130 amino acids
Sequence
(BLAST)
(BLAST)
001: MVPSKPEEVV TVDVSQAKTL LQSDHQYLDV RTEEEFRRGH CVAPKILNVP YMLSTPQGRV KNPNFLDQVS SLLSPTDDIL VGCQSGARSL NATSELVAAG
101: YKKVRNIGGG YLAWVDQSFP INKEQQQSAN
101: YKKVRNIGGG YLAWVDQSFP INKEQQQSAN
001: MSQSISSSTK AEEVVSVDVS QAKTLLQSGH QYLDVRTQDE FRRGHCEAAK IVNIPYMLNT PQGRVKNQEF LEQVSSLLNP ADDILVGCQS GARSLKATTE
101: LVAAGYKKVR NVGGGYLAWV DHSFPINTEE EEPSAN
101: LVAAGYKKVR NVGGGYLAWV DHSFPINTEE EEPSAN
Arabidopsis Description
STR18Sulfurtransferase 18 [Source:UniProtKB/TrEMBL;Acc:F4JZ39]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.