Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_04s0023g03590.t01 | Wine grape | cytosol | 79.7 | 66.67 |
| Solyc02g083730.2.1 | Tomato | cytosol | 61.65 | 63.57 |
| PGSC0003DMT400009210 | Potato | endoplasmic reticulum | 63.16 | 60.0 |
| GSMUA_Achr5P18880_001 | Banana | endoplasmic reticulum | 59.4 | 56.43 |
| KRH76647 | Soybean | endoplasmic reticulum | 60.15 | 53.69 |
| CDY30783 | Canola | cytosol | 49.62 | 52.38 |
| CDY45212 | Canola | cytosol | 49.62 | 52.38 |
| KRH28807 | Soybean | endoplasmic reticulum | 58.65 | 52.35 |
| Bra012056.1-P | Field mustard | cytosol | 49.62 | 50.77 |
| CDY45211 | Canola | cytosol | 49.62 | 50.77 |
| GSMUA_Achr8P19470_001 | Banana | mitochondrion | 32.33 | 50.0 |
| KRH08053 | Soybean | cytosol | 58.65 | 49.68 |
| KRH69767 | Soybean | cytosol | 58.65 | 49.37 |
| AT5G66170.2 | Thale cress | cytosol | 51.13 | 49.28 |
| CDY57763 | Canola | cytosol | 48.12 | 48.48 |
| Bra031805.1-P | Field mustard | cytosol | 47.37 | 47.73 |
| CDY55100 | Canola | cytosol | 39.1 | 44.07 |
| CDY29204 | Canola | endoplasmic reticulum, extracellular, vacuole | 45.11 | 39.22 |
| CDY07813 | Canola | endoplasmic reticulum | 44.36 | 38.56 |
| AT2G17850.3 | Thale cress | endoplasmic reticulum | 49.62 | 35.11 |
| VIT_00s0684g00030.t01 | Wine grape | plastid | 41.35 | 30.39 |
Protein Annotations
| EntrezGene:100260808 | wikigene:100260808 | Gene3D:3.40.250.10 | MapMan:35.1 | ProteinID:CCB44353 | ProteinID:CCB44353.1 |
| UniProt:F6GWL8 | EMBL:FN594959 | InterPro:IPR001763 | InterPro:IPR036873 | EntrezGene:LOC100260808 | wikigene:LOC100260808 |
| PFAM:PF00581 | PFscan:PS50206 | PANTHER:PTHR44542 | PANTHER:PTHR44542:SF3 | InterPro:Rhodanese-like_dom | InterPro:Rhodanese-like_dom_sf |
| SMART:SM00450 | SUPFAM:SSF52821 | TIGR:TC55226 | UniParc:UPI0002108970 | ArrayExpress:VIT_04s0023g03600 | EnsemblPlantsGene:VIT_04s0023g03600 |
| EnsemblPlants:VIT_04s0023g03600.t01 | unigene:Vvi.15926 | RefSeq:XP_002265009 | RefSeq:XP_002265009.1 | : | : |
Description
No Description!
Coordinates
chr4:-:20127357..20131053
Molecular Weight (calculated)
14637.4 Da
IEP (calculated)
4.915
GRAVY (calculated)
-0.113
Length
133 amino acids
Sequence
(BLAST)
(BLAST)
001: MQQLNQDVIS ATEVVTIDVH AAKDLINSGY RYLDVRTVEE FKKGHADVEN ILNIPYLFTT PEGRVKNPEF LEQVQFACSK EDHLIVGCQS GVRSLAATSV
101: LVSAGFKDVK DIGGGYLAWV QNGLVATKPK EEL
101: LVSAGFKDVK DIGGGYLAWV QNGLVATKPK EEL
001: MDSLHVLRSF LLLFIVFNHL PRTTTSMSEP KVITIDVNQA QKLLDSGYTF LDVRTVEEFK KGHVDSENVF NVPYWLYTPQ GQEINPNFLK HVSSLCNQTD
101: HLILGCKSGV RSLHATKFLV SSGFKTVRNM DGGYIAWVNK RFPVKVEHKE LKYDEL
101: HLILGCKSGV RSLHATKFLV SSGFKTVRNM DGGYIAWVNK RFPVKVEHKE LKYDEL
Arabidopsis Description
Rhodanese/Cell cycle control phosphatase superfamily protein [Source:TAIR;Acc:AT2G17850]
SUBAcon: [endoplasmic reticulum,extracellular]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.