Factsheet for Bra006236.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra011357.1-P
Bra013179.1-P
Bra022254.1-P
Bra028713.1-P
Bra040086.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G14070.1	Bra013179.1-P	AT2G05230.1	21798944
AT5G14070.1	Bra013179.1-P	AT2G05250.1	21798944
AT5G14070.1	Bra022254.1-P	AT3G17860.1	21798944
AT5G14070.1	Bra011357.1-P	AT4G32570.1	21798944
AT5G14070.1	Bra040086.1-P	AT4G32570.1	21798944
AT5G14070.1	Bra028713.1-P	AT5G06960.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78558	Canola	cytosol	100.0	99.27
Bra008782.1-P	Field mustard	cytosol	88.97	90.3
Bra023448.1-P	Field mustard	cytosol	87.5	86.86
AT5G14070.1	Thale cress	cytosol	87.5	85.0
Bra000980.1-P	Field mustard	cytosol	77.21	76.64
KRG94592	Soybean	plastid	60.29	62.12
KRH06898	Soybean	plastid	61.03	61.94
GSMUA_Achr3P18710_001	Banana	cytosol	60.29	61.65
GSMUA_AchrUn_...	Banana	cytosol	58.82	61.54
EES05136	Sorghum	cytosol	58.09	61.24
GSMUA_Achr10P...	Banana	cytosol	60.29	60.74
Zm00001d016593_P001	Maize	cytosol	56.62	59.23
PGSC0003DMT400013427	Potato	mitochondrion, plastid	52.21	59.17
Solyc01g009910.1.1	Tomato	mitochondrion, plastid	52.21	59.17
PGSC0003DMT400013435	Potato	cytosol, plastid	52.21	59.17
GSMUA_Achr6P23860_001	Banana	plastid	58.82	58.82
Os04t0393500-01	Rice	cytosol	58.09	58.52
HORVU0Hr1G003840.1	Barley	extracellular	57.35	58.21
TraesCS2A01G285600.1	Wheat	cytosol, extracellular	57.35	58.21
Solyc05g015910.1.1	Tomato	cytosol	55.88	58.02
KRH70543	Soybean	cytosol	56.62	57.89
Bra001830.1-P	Field mustard	cytosol, plastid	43.38	57.84
Os02t0512400-01	Rice	cytosol	57.35	57.78
Solyc01g009900.2.1	Tomato	cytosol, plastid	50.74	57.5
PGSC0003DMT400006076	Potato	plastid	56.62	57.46
TraesCS2D01G284300.1	Wheat	cytosol, extracellular	56.62	57.46
TraesCS2B01G302700.1	Wheat	cytosol, extracellular	56.62	57.46
Zm00001d003927_P001	Maize	cytosol	57.35	56.93
EES10652	Sorghum	cytosol	57.35	56.93
Bra001831.1-P	Field mustard	cytosol	42.65	56.86
Bra023883.1-P	Field mustard	cytosol, plastid	41.91	55.88
KRH01571	Soybean	cytosol	57.35	54.93
Bra023688.1-P	Field mustard	cytosol	41.18	54.9
PGSC0003DMT400013430	Potato	cytosol	51.47	53.85
Solyc01g009890.1.1	Tomato	cytosol, plastid	51.47	53.85
Bra033504.1-P	Field mustard	cytosol	37.5	53.12
Bra006467.1-P	Field mustard	cytosol	39.71	52.94
Bra002171.1-P	Field mustard	cytosol	39.71	52.94
Bra033503.1-P	Field mustard	cytosol	38.97	51.96
Bra033501.1-P	Field mustard	cytosol	38.24	50.98
VIT_01s0146g00220.t01	Wine grape	cytosol	56.62	49.36
Bra012773.1-P	Field mustard	cytosol	36.76	49.02
Bra038075.1-P	Field mustard	cytosol	36.03	48.04
Bra021641.1-P	Field mustard	cytosol	36.03	48.04
Bra033499.1-P	Field mustard	cytosol	34.56	47.96
Bra004426.1-P	Field mustard	cytosol	36.03	47.57
Bra038076.1-P	Field mustard	cytosol, extracellular	35.29	47.52
Bra031540.1-P	Field mustard	cytosol	34.56	47.47
Bra004424.1-P	Field mustard	cytosol	35.29	47.06
Bra018307.1-P	Field mustard	cytosol	35.29	47.06
Bra014380.1-P	Field mustard	cytosol	35.29	46.6
Bra007717.1-P	Field mustard	cytosol	25.74	45.45
Bra021444.1-P	Field mustard	cytosol	34.56	44.76
Bra007718.1-P	Field mustard	cytosol	33.09	44.12
Bra014379.1-P	Field mustard	cytosol	32.35	43.14
Bra003517.1-P	Field mustard	cytosol, extracellular	31.62	42.16
Bra014382.1-P	Field mustard	cytosol	30.88	41.18
Bra003515.1-P	Field mustard	cytosol	30.15	40.2
Bra033366.1-P	Field mustard	cytosol	29.41	39.22
Bra032563.1-P	Field mustard	cytosol	29.41	39.22
Bra007714.1-P	Field mustard	cytosol	29.41	39.22
Bra015532.1-P	Field mustard	cytosol	33.82	31.72

Protein Annotations

MapMan:18.8.2	Gene3D:3.40.30.10	EnsemblPlantsGene:Bra006236	EnsemblPlants:Bra006236.1	EnsemblPlants:Bra006236.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152
GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454
GO:GO:0055114	InterPro:GlrX-like_pln_2	InterPro:Glutaredoxin	InterPro:IPR002109	UniProt:M4CPU7	PFAM:PF00462
PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF128	SUPFAM:SSF52833	TIGRFAMs:TIGR02189	InterPro:Thioredoxin-like_sf
UniParc:UPI000253FB3B	:	:	:	:	:

Description

AT5G14070 (E=2e-064) ROXY2 | ROXY2; electron carrier/ protein disulfide oxidoreductase

Coordinates

chrA03:+:2643187..2643597

Molecular Weight (calculated)

14424.8 Da

IEP (calculated)

8.345

GRAVY (calculated)

0.359

Length

136 amino acids

Sequence
(BLAST)

001: MQYRTETRGS LSYNKVNNMG VFPSDSLVRI ESMAAESAVV IFSVSTCCMC HAVKGLFRGM GVSPAVHELD LHPYGVDIHR ALLRLLGCSS GASTSPGGLP
101: VVFIGGKMVG SMERVMASHI NGSLVPLLKD AGALWL

Best Arabidopsis Sequence Match ( AT5G14070.1 )
(BLAST)

001: MQYKTETRGS LSYNNNSKVM NNMNVFPSET LAKIESMAAE NAVVIFSVST CCMCHAIKRL FRGMGVSPAV HELDLLPYGV EIHRALLRLL GCSSGGATSP
101: GALPVVFIGG KMVGAMERVM ASHINGSLVP LLKDAGALWL

Arabidopsis Description

GRXC8Glutaredoxin-C8 [Source:UniProtKB/Swiss-Prot;Acc:Q8LF89]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.