Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- cytosol 3
- plastid 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G284300.1 | Wheat | cytosol, extracellular | 87.41 | 88.06 |
| HORVU0Hr1G003840.1 | Barley | extracellular | 87.41 | 88.06 |
| Os02t0512400-01 | Rice | cytosol | 87.41 | 87.41 |
| TraesCS2B01G302700.1 | Wheat | cytosol, extracellular | 86.67 | 87.31 |
| TraesCS2A01G285600.1 | Wheat | cytosol, extracellular | 86.67 | 87.31 |
| GSMUA_Achr10P... | Banana | cytosol | 74.81 | 74.81 |
| GSMUA_Achr6P23860_001 | Banana | plastid | 73.33 | 72.79 |
| GSMUA_Achr3P18710_001 | Banana | cytosol | 70.37 | 71.43 |
| KRG94592 | Soybean | plastid | 69.63 | 71.21 |
| GSMUA_AchrUn_... | Banana | cytosol | 67.41 | 70.0 |
| KRH06898 | Soybean | plastid | 68.89 | 69.4 |
| KRH70543 | Soybean | cytosol | 65.93 | 66.92 |
| Solyc05g015910.1.1 | Tomato | cytosol | 64.44 | 66.41 |
| PGSC0003DMT400013435 | Potato | cytosol, plastid | 57.78 | 65.0 |
| Solyc01g009910.1.1 | Tomato | mitochondrion, plastid | 57.04 | 64.17 |
| Solyc01g009900.2.1 | Tomato | cytosol, plastid | 57.04 | 64.17 |
| Os01t0368900-01 | Rice | cytosol | 48.89 | 64.08 |
| PGSC0003DMT400006076 | Potato | plastid | 62.96 | 63.43 |
| CDX74327 | Canola | cytosol | 63.7 | 62.77 |
| Bra000980.1-P | Field mustard | cytosol | 63.7 | 62.77 |
| CDX91918 | Canola | cytosol | 62.22 | 62.69 |
| AT3G02000.1 | Thale cress | cytosol | 62.96 | 62.5 |
| PGSC0003DMT400013427 | Potato | mitochondrion, plastid | 55.56 | 62.5 |
| Os12t0538600-00 | Rice | cytosol, extracellular | 47.41 | 62.14 |
| KRH01571 | Soybean | cytosol | 65.19 | 61.97 |
| Os11t0655900-01 | Rice | extracellular | 48.89 | 61.11 |
| Os11t0656000-00 | Rice | cytosol, plastid | 48.15 | 59.63 |
| Os12t0538700-01 | Rice | cytosol | 45.93 | 59.62 |
| Solyc01g009890.1.1 | Tomato | cytosol, plastid | 57.04 | 59.23 |
| Os11t0656700-00 | Rice | cytosol, plastid | 47.41 | 58.72 |
| PGSC0003DMT400013430 | Potato | cytosol | 56.3 | 58.46 |
| CDX85614 | Canola | cytosol | 59.26 | 58.39 |
| Bra023448.1-P | Field mustard | cytosol | 59.26 | 58.39 |
| Bra006236.1-P | Field mustard | cytosol | 58.52 | 58.09 |
| Os11t0656400-00 | Rice | cytosol, plastid | 46.67 | 57.8 |
| CDX91084 | Canola | cytosol | 58.52 | 57.66 |
| CDX78558 | Canola | cytosol | 58.52 | 57.66 |
| CDX70540 | Canola | cytosol | 58.52 | 57.66 |
| VIT_01s0146g00220.t01 | Wine grape | cytosol | 65.93 | 57.05 |
| Bra008782.1-P | Field mustard | cytosol | 56.3 | 56.72 |
| AT5G14070.1 | Thale cress | cytosol | 58.52 | 56.43 |
| Os05t0149950-00 | Rice | cytosol, mitochondrion | 47.41 | 56.14 |
| Os01t0936000-00 | Rice | cytosol | 48.89 | 52.8 |
| CDX69609 | Canola | cytosol | 37.04 | 49.51 |
| CDY58422 | Canola | cytosol | 47.41 | 38.1 |
| Os07t0151100-01 | Rice | cytosol | 51.85 | 36.46 |
Protein Annotations
| MapMan:18.8.2 | Gene3D:3.40.30.10 | EntrezGene:4335686 | ProteinID:BAF14563.2 | ProteinID:BAS88985.1 | ProteinID:CAD40555.1 |
| EMBL:FJ463033 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005737 | GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 |
| GO:GO:0009987 | GO:GO:0015035 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0019725 | GO:GO:0022900 |
| GO:GO:0045454 | GO:GO:0055114 | InterPro:GlrX-like_pln_2 | InterPro:Glutaredoxin | InterPro:IPR002109 | EnsemblPlantsGene:Os04g0393500 |
| EnsemblPlants:Os04t0393500-01 | PFAM:PF00462 | PFscan:PS51354 | PANTHER:PTHR10168 | PANTHER:PTHR10168:SF128 | UniProt:Q0JDM4 |
| SUPFAM:SSF52833 | TIGRFAMs:TIGR02189 | TMHMM:TMhelix | InterPro:Thioredoxin-like_sf | UniParc:UPI00001B1D21 | RefSeq:XP_015635298.1 |
| SEG:seg | : | : | : | : | : |
Description
GLUTAREDOXIN 13CC-type glutaredoxin, Floral organ development and pathogen response (Os04t0393500-01)
Coordinates
chr4:+:19356400..19356807
Molecular Weight (calculated)
13916.1 Da
IEP (calculated)
6.917
GRAVY (calculated)
0.604
Length
135 amino acids
Sequence
(BLAST)
(BLAST)
001: MQYGAAAAEQ AWYMPAAAMV VAAAAETAAE RVERLASESA VVVFSVSSCC MCHAVKRLFC GMGVHPAVHE LDLDPRGRDL ERALARLVGA GGAAAAAVPV
101: VFIGGKLVGA MDRVMAAHIN GSLVPLLKEA GALWL
101: VFIGGKLVGA MDRVMAAHIN GSLVPLLKEA GALWL
001: MQYQTESWGS YKMSSLGFGG LGMVADTGLL RIESLASESA VVIFSVSTCC MCHAVKGLFR GMGVSPAVHE LDLHPYGGDI QRALIRLLGC SGSSSPGSLP
101: VVFIGGKLVG AMDRVMASHI NGSLVPLLKD AGALWL
101: VVFIGGKLVG AMDRVMASHI NGSLVPLLKD AGALWL
Arabidopsis Description
GRXC7ROXY1 [Source:UniProtKB/TrEMBL;Acc:A0A178VBU2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.